RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 LAPTM5Q13571 262 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 ELOAQ14241 798 aaKnown RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 NAA30Q147X3 362 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 NR6A1Q15406 480 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 NSDHLQ15738 373 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 EXT1Q16394 746 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 C18orf21Q32NC0 220 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 DEFB134Q4QY38 66 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 UBAP2Q5T6F2 1119 aaKnown RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 PLAG1Q6DJT9 500 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 H3F3CQ6NXT2 135 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 WDR93Q6P2C0 686 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 TMIGD1Q6UXZ0 262 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 LANCL3Q6ZV70 420 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 RAPH1Q70E73 1250 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 TRMT10CQ7L0Y3 403 aaKnown RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 TBC1D1Q86TI0 1168 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 KRT78Q8N1N4 520 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 SPATA6LQ8N4H0 392 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 SIRT6Q8N6T7 355 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 PDPRQ8NCN5 879 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 OR1N1Q8NGS0 311 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 UHMK1Q8TAS1 419 aaKnown RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 M1APQ8TC57 530 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 CREB3L4Q8TEY5 395 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 UBLCP1Q8WVY7 318 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 ZNF354BQ96LW1 612 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 NPLQ9BXD5 320 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 UNKQ9C0B0 810 aaKnown RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 LANCL2Q9NS86 450 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 DNAJC11Q9NVH1 559 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 STMN3Q9NZ72 180 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 CD274Q9NZQ7 290 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 COPG2Q9UBF2 871 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 PTBP2Q9UKA9 531 aaKnown RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 RNF112Q9ULX5 631 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 CSAG2Q9Y5P2 127 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 USP9XQ93008 2570 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 HECTD1Q9ULT8 2610 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 GTF3C1Q12789 2109 aa8.21□□□□□ -1.09
ACTN1-213ENST00000554508 A0A087WUV0 522 aaPredicted RBP8.21□□□□□ -1.1
ACTN1-213ENST00000554508 A0A088AWK7 358 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 IGHV3-20A0A0C4DH32 117 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 ANKUB1A6NFN9 424 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 ZNF860A6NHJ4 632 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 ANKDD1BA6NHY2 528 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 PSMD12O00232 456 aaPredicted RBP8.21□□□□□ -1.1
ACTN1-213ENST00000554508 CDK2AP1O14519 115 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 PRMT3O60678 531 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 CLEC3AO75596 197 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 FAM155BO75949 473 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 SEC24DO94855 1032 aaPredicted RBP8.21□□□□□ -1.1
ACTN1-213ENST00000554508 AGFG2O95081 481 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 DDAH2O95865 285 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 SLC35E2BP0CK96 405 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 RNH1P13489 461 aaKnown RBP8.21□□□□□ -1.1
ACTN1-213ENST00000554508 ZNF10P21506 573 aaPredicted RBP8.21□□□□□ -1.1
ACTN1-213ENST00000554508 HSPA7P48741 367 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 TNFSF10P50591 281 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 OR4D2P58180 307 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 RAB8AP61006 207 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 MRPL49Q13405 166 aaKnown RBP8.21□□□□□ -1.1
ACTN1-213ENST00000554508 ABRAXAS2Q15018 415 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 EFTUD2Q15029 972 aaKnown RBP eCLIP8.21□□□□□ -1.14e-6■■■□□ 17.6
ACTN1-213ENST00000554508 OR4D1Q15615 310 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 TBCCQ15814 346 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 UAP1Q16222 522 aaPredicted RBP8.21□□□□□ -1.1
ACTN1-213ENST00000554508 INAQ16352 499 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 HIST2H2ACQ16777 129 aaPredicted RBP8.21□□□□□ -1.1
ACTN1-213ENST00000554508 MEP1AQ16819 746 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 EIF2S3LQ2VIR3 472 aaKnown RBP8.21□□□□□ -1.1
ACTN1-213ENST00000554508 BTBD16Q32M84 506 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 SFT2D3Q587I9 215 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 PAGE2BQ5JRK9 111 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 TOR1AIP1Q5JTV8 583 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 ABHD17BQ5VST6 288 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 HIST2H2AA3Q6FI13 130 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 QSOX2Q6ZRP7 698 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 LRRC70Q7Z2Q7 622 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 ISCA2Q86U28 154 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 ST6GALNAC3Q8NDV1 305 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 CATSPER1Q8NEC5 780 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 OR5T3Q8NGG3 340 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 SUN3Q8TAQ9 357 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 PRR7Q8TB68 274 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 GRHL3Q8TE85 626 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 FAR1Q8WVX9 515 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 GAL3ST3Q96A11 431 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 WDR34Q96EX3 536 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 FAR2Q96K12 515 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 PTCHD1Q96NR3 888 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 LPAR4Q99677 370 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 TMEM79Q9BSE2 394 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 CD244Q9BZW8 370 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.21□□□□□ -1.11e-6■■□□□ 14.2
ACTN1-213ENST00000554508 KLHL31Q9H511 634 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 KCNK13Q9HB14 408 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 MMP25Q9NPA2 562 aa8.21□□□□□ -1.1
ACTN1-213ENST00000554508 NUDT4Q9NZJ9 180 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms