RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 EPS8L2Q9H6S3 715 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 PCTPQ9UKL6 214 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 PCM1Q15154 2024 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 CCDC88CQ9P219 2028 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 SNRNP200O75643 2136 aaKnown RBP13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 CROCCQ5TZA2 2017 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 A0A1W2PPV9 198 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 E7ENX8 843 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 E2F3O00716 465 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 SOCS6O14544 535 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 ZG16O60844 167 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 SERPINE1P05121 402 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 PIM1P11309 404 aaPredicted RBP13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 EPORP19235 508 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 ITGAXP20702 1163 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 GDF5P43026 501 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 TSFMP43897 325 aaKnown RBP13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 TAP2Q03519 686 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 ZNF169Q14929 603 aaPredicted RBP13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 ARHGAP19Q14CB8 494 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 NKG7Q16617 165 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 TUBB8Q3ZCM7 444 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 TTC19Q6DKK2 380 aaPredicted RBP13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 TTC23LQ6PF05 361 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 RGS9BPQ6ZS82 235 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 MCATQ8IVS2 390 aaKnown RBP13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 OR2L8Q8NGY9 312 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 HMGCLL1Q8TB92 370 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 FAR1Q8WVX9 515 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 ATL1Q8WXF7 558 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 ZNF75CPQ92670 426 aaPredicted RBP13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 MARVELD3Q96A59 401 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 NACC2Q96BF6 587 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 MAGEB18Q96M61 343 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 OR4K3Q96R72 315 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 SGPP1Q9BX95 441 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 C20orf27Q9GZN8 174 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 ZBTB26Q9HCK0 441 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 WWOXQ9NZC7 414 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 SEC16AO15027 2179 aa13.31□□□□□ -0.28
SPTLC2-202ENST00000554365 KLF11O14901 512 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 HNRNPRO43390 633 aaKnown RBP13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 ITM2AO43736 263 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 PRICKLE3O43900 615 aaPredicted RBP13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 SNNO75324 88 aaPredicted RBP13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 ALBP02768 609 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 EDN3P14138 238 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 GRIA3P42263 894 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 RAB28P51157 221 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 TBPL1P62380 186 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 BST1Q10588 318 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 NAE1Q13564 534 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 ZRSR2Q15696 482 aaKnown RBP13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 RBBP7Q16576 425 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 METTL2BQ6P1Q9 378 aaKnown RBP13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 KIRREL2Q6UWL6 708 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 IGFL2Q6UWQ7 119 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 LINC00696Q6ZRV3 163 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 FRMD7Q6ZUT3 714 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 COX15Q7KZN9 410 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 MTERF4Q7Z6M4 381 aaKnown RBP13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 TAX1BP1Q86VP1 789 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 METTL27Q8N6F8 245 aaPredicted RBP13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 RAB3IL1Q8TBN0 382 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 PYCR2Q96C36 320 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 THOC3Q96J01 351 aaKnown RBP13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 SPSB2Q99619 263 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 LHPPQ9H008 270 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 ZNF395Q9H8N7 513 aaPredicted RBP13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 WDR54Q9H977 334 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 CUTCQ9NTM9 273 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 INTS7Q9NVH2 962 aaKnown RBP13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 CTSFQ9UBX1 484 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 TNPO3Q9Y5L0 923 aaKnown RBP13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 HS3ST3B1Q9Y662 390 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 LRBAP50851 2863 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 CSMD1Q96PZ7 3565 aa13.3□□□□□ -0.28
SPTLC2-202ENST00000554365 A0A1B0GTL3 188 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 K7EPI3 171 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 PPP6CO00743 305 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 UBFD1O14562 309 aaKnown RBP13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 DSCR3O14972 297 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 NPHS1O60500 1241 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 PRAMEF4O60810 478 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 STK16O75716 305 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 PRF1P14222 555 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 HSD17B2P37059 387 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 GCGRP47871 477 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 CDH13P55290 713 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 RCN2Q14257 317 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 TLR1Q15399 786 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 ZC3H12BQ5HYM0 836 aaKnown RBP13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 PRAMEF9Q5VWM5 478 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 FAM219BQ5XKK7 198 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 B3GNTL1Q67FW5 361 aaPredicted RBP13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 SP5Q6BEB4 398 aaPredicted RBP13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 FAM180AQ6UWF9 173 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 SUSD1Q6UWL2 747 aa13.29□□□□□ -0.28
SPTLC2-202ENST00000554365 LRRC70Q7Z2Q7 622 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms