RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 LRMDAQ9H2I8 198 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 LRRN3Q9H3W5 708 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 ZNF768Q9H5H4 540 aaKnown RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 CLMPQ9H6B4 373 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 ACTR5Q9H9F9 607 aaPredicted RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 LHX9Q9NQ69 397 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 SOHLH2Q9NX45 425 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 NDE1Q9NXR1 346 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 CCDC167Q9P0B6 97 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 NCDNQ9UBB6 729 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 FTSJ1Q9UET6 329 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 PLCL2Q9UPR0 1127 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 BTBD3Q9Y2F9 522 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 HCN4Q9Y3Q4 1203 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 SLC22A7Q9Y694 548 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 ASXL3Q9C0F0 2248 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 SNRNP200O75643 2136 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 DMDP11532 3685 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 LOC105369274A0A096LPK9 316 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 A0A0A6YYD5 115 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 LOC102723532A0A0G2JNH3 316 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 A0A1W2PP18 115 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 A0A1W2PQM1 296 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 FITM1A5D6W6 292 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 D6RAR5 112 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SAP18O00422 153 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 NR5A2O00482 541 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 NTN3O00634 580 aaPredicted RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 ANGPT2O15123 496 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SCAMP2O15127 329 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 CFLARO15519 480 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 P2RX6O15547 441 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 TBX19O60806 448 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SH3BGRLO75368 114 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 EEDO75530 441 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 LDOC1O95751 146 aaPredicted RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 KLK1P06870 262 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SMIM10L1P0DMW3 83 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 MYF5P13349 255 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 CD59P13987 128 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 NELFEP18615 380 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 HIST1H1TP22492 207 aaPredicted RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 TACR1P25103 407 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 PTPN4P29074 926 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 TPP2P29144 1249 aaPredicted RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 SSR2P43308 183 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 ZFP36L2P47974 494 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 ARL4DP49703 201 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 MAPK12P53778 367 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 PLA2G16P53816 162 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 MTTPP55157 894 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 VSX2P58304 361 aaPredicted RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 NCALDP61601 193 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 UFM1P61960 85 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SRSF11Q05519 484 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 SPEM2Q0P670 501 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 LRRC74AQ0VAA2 488 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 ILKQ13418 452 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 TRA2AQ13595 282 aaKnown RBP eCLIP7.28□□□□□ -1.24
TDP1-209ENST00000554180 PDE7AQ13946 482 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SF3A2Q15428 464 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 NDUFA9Q16795 377 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SPRED3Q2MJR0 410 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 PRTGQ2VWP7 1150 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 DNAL1Q4LDG9 190 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 TOR1AIP1Q5JTV8 583 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 CCNYL2Q5T2Q4 361 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 TMTC4Q5T4D3 741 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 GARNL3Q5VVW2 1013 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 FRMPD2BQ6IN97 320 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 TMEM214Q6NUQ4 689 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 HACD2Q6Y1H2 254 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 PRR23CQ6ZRP0 262 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 GK5Q6ZS86 529 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 USP53Q70EK8 1073 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 ARHGAP22Q7Z5H3 698 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 R3HCC1LQ7Z5L2 792 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 MCATQ8IVS2 390 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 NAXDQ8IW45 347 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 OR4N4Q8N0Y3 316 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 NATD1Q8N6N6 113 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 POU5F2Q8N7G0 328 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 PCYOX1LQ8NBM8 494 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 DNAJB8Q8NHS0 232 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 RHBDD1Q8TEB9 315 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 UTP15Q8TED0 518 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 ROPN1LQ96C74 230 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SPDL1Q96EA4 605 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SMIM10Q96HG1 83 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 TEX37Q96LM6 180 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 TSSK3Q96PN8 268 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 PRPF18Q99633 342 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 CDC6Q99741 560 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 C17orf62Q9BQA9 187 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 NUDT22Q9BRQ3 303 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 EBPLQ9BY08 206 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 AICDAQ9GZX7 198 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SYNPO2LQ9H987 977 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 COPS7BQ9H9Q2 264 aaPredicted RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 EFCAB1Q9HAE3 211 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms