RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 KIAA0141Q14154 515 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-210ENST00000553693 ZNF146Q15072 292 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 RNF212Q495C1 297 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 ATP1A1-AS1Q5TC04 95 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 VITQ6UXI7 678 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 ZBTB49Q6ZSB9 765 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 TIPARPQ7Z3E1 657 aaKnown RBP3.08□□□□□ -1.92
SCFD1-210ENST00000553693 CENPVQ7Z7K6 275 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-210ENST00000553693 AVL9Q8NBF6 648 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 CYYR1Q96J86 154 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 CNDP2Q96KP4 475 aaKnown RBP3.08□□□□□ -1.92
SCFD1-210ENST00000553693 MUS81Q96NY9 551 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 KLHL5Q96PQ7 755 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 FEVQ99581 238 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 SLF1Q9BQI6 1058 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 APOL6Q9BWW8 343 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 SLC2A11Q9BYW1 496 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 KLHL4Q9C0H6 718 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 GPR88Q9GZN0 384 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 SDCBP2Q9H190 292 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 ADNPQ9H2P0 1102 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 ANKEF1Q9NU02 776 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 HACD3Q9P035 362 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-210ENST00000553693 STYXL1Q9Y6J8 313 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 KANK1Q14678 1352 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 PIK3R4Q99570 1358 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 DCCP43146 1447 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 PTCH1Q13635 1447 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 RALGAPBQ86X10 1494 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 IGHV3-20A0A0C4DH32 117 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 IGHV3-38A0A0C4DH36 116 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 A0A1W2PRQ8 180 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 TLX2O43763 284 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-210ENST00000553693 AHCYL1O43865 530 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 LRCH4O75427 683 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 MTRF1O75570 445 aaKnown RBP3.07□□□□□ -1.92
SCFD1-210ENST00000553693 BAG3O95817 575 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 MYL6BP14649 208 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 AKR1B1P15121 316 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 PKLRP30613 574 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 RASGEF1BQ0VAM2 473 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 ILF2Q12905 390 aaKnown RBP3.07□□□□□ -1.92
SCFD1-210ENST00000553693 SNTB1Q13884 538 aaKnown RBP3.07□□□□□ -1.92
SCFD1-210ENST00000553693 NONOQ15233 471 aaKnown RBP eCLIP3.07□□□□□ -1.92
SCFD1-210ENST00000553693 UPP1Q16831 310 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 TMEM266Q2M3C6 531 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 KRT39Q6A163 491 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 UNC5CLQ8IV45 518 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 TCEANCQ8N8B7 351 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 OR4C15Q8NGM1 316 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 TYMSOSQ8TAI1 123 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 SPPL2AQ8TCT8 520 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 ATP6V1E2Q96A05 226 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 BAG1Q99933 345 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-210ENST00000553693 CENPOQ9BU64 300 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 DNAI2Q9GZS0 605 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 IL36AQ9UHA7 158 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 IL16Q14005 1332 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 METP08581 1390 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 ABCC5O15440 1437 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 ERBINQ96RT1 1412 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 ADGRL3Q9HAR2 1447 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 C1orf167Q5SNV9 1468 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 TRPM2O94759 1503 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 LMTK2Q8IWU2 1503 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 GLI3P10071 1580 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 TMEM131LA2VDJ0 1609 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 ZNF646O15015 1829 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-210ENST00000553693 MYO5BQ9ULV0 1848 aa3.07□□□□□ -1.92
SCFD1-210ENST00000553693 DKC1O60832 514 aaKnown RBP eCLIP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 TBCAO75347 108 aaKnown RBP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 ATP6AP2O75787 350 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 PGM3O95394 542 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 SFTPDP35247 375 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 MYOM2P54296 1465 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 CSE1LP55060 971 aaKnown RBP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 POLR2LP62875 67 aaKnown RBP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 LETM2Q2VYF4 491 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 ALDH1L2Q3SY69 923 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 MYOM3Q5VTT5 1437 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 RNLSQ5VYX0 342 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 BRWD3Q6RI45 1802 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 PRSS55Q6UWB4 352 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 C16orf54Q6UWD8 224 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 NPHP3Q7Z494 1330 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 KRT77Q7Z794 578 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 CCDC60Q8IWA6 550 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 LSMEM1Q8N8F7 131 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 GBP7Q8N8V2 638 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 GPATCH11Q8N954 259 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 NSMAFQ92636 917 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 OTUB1Q96FW1 271 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 UBAC1Q9BSL1 405 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 RBM24Q9BX46 236 aaKnown RBP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 OCR1Q9BZK8 76 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 ACTL8Q9H568 366 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms