RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 KANK2Q63ZY3 851 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ICE2Q659A1 982 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 NXNQ6DKJ4 435 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 LAIR1Q6GTX8 287 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ZCCHC8Q6NZY4 707 aaKnown RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 MED27Q6P2C8 311 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 SUSD1Q6UWL2 747 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 MBOAT1Q6ZNC8 495 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 SPATA19Q7Z5L4 167 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 SYVN1Q86TM6 617 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 GGNQ86UU5 652 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 MYLK4Q86YV6 388 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 DDIASQ8IXT1 998 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ARL14Q8N4G2 192 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 CDYL2Q8N8U2 506 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 PPFIBP2Q8ND30 876 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 SRFBP1Q8NEF9 429 aaKnown RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF548Q8NEK5 533 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 GPR156Q8NFN8 814 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ACTRT2Q8TDY3 377 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 TWIST2Q8WVJ9 160 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 SLC5A11Q8WWX8 675 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 SELENOMQ8WWX9 145 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 PYCR2Q96C36 320 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 WDR34Q96EX3 536 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ZDHHC12Q96GR4 267 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 PPP3R2Q96LZ3 170 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 LRRC37BQ96QE4 947 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 DPYSL5Q9BPU6 564 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 CENPKQ9BS16 269 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 TMEM120AQ9BXJ8 343 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 NUF2Q9BZD4 464 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 SHCBP1LQ9BZQ2 653 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 TCEAL2Q9H3H9 227 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ELOVL6Q9H5J4 265 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 RABEP2Q9H5N1 569 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 GAREM1Q9H706 876 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 MEAF6Q9HAF1 191 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 BRF2Q9HAW0 419 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 KCNK13Q9HB14 408 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ZBTB26Q9HCK0 441 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 TCF7L2Q9NQB0 619 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ABCF3Q9NUQ8 709 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 TMEM74BQ9NUR3 256 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 HEY2Q9UBP5 337 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 MARCOQ9UEW3 520 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 GMEB2Q9UKD1 530 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF490Q9ULM2 529 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 MAPRE3Q9UPY8 281 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 FIS1Q9Y3D6 152 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 TSC22D4Q9Y3Q8 395 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 CUL9Q8IWT3 2517 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 NCOR1O75376 2440 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 A0A1B0GTL3 188 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 OR6C74A6NCV1 312 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TTC36A6NLP5 189 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 MANBAO00462 879 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TXNDC9O14530 226 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 UBFD1O14562 309 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 UBDO15205 165 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 SLC22A2O15244 555 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TNFSF14O43557 240 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 PRICKLE3O43900 615 aaPredicted RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 PCDHGA12O60330 932 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 NOBOXO60393 691 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 HNRNPCL1O60812 293 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 KIAA0754O94854 1291 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 UBXN7O94888 489 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 KCNH1O95259 989 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 CHRM5P08912 532 aaPredicted RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 LINC00032P0C843 101 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF883P0CG24 379 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 PRPS2P11908 318 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 DDX5P17844 614 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 PTX3P26022 381 aaPredicted RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 EPHA8P29322 1005 aaPredicted RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 SERPINB3P29508 390 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 PIK3CBP42338 1070 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 MNAT1P51948 309 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ARFIP1P53367 373 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 SLURP1P55000 103 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 STX1BP61266 288 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 UBE2IP63279 158 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 EMX2Q04743 252 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 BTKQ06187 659 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TGM3Q08188 693 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 CSTF3Q12996 717 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TRAF3Q13114 568 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 SLC14A1Q13336 389 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 E2F2Q14209 437 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 FASTKQ14296 549 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 GPR18Q14330 331 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 RBBP5Q15291 538 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 MAPRE2Q15555 327 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 PDCD2Q16342 344 aaPredicted RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 GSTA3Q16772 222 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 DEFB133Q30KQ1 61 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 UGT3A2Q3SY77 523 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ATP6AP1LQ52LC2 224 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ZC3H12BQ5HYM0 836 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms