RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 LSM14AQ8ND56 463 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 OR2L5Q8NG80 312 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 OR7G3Q8NG95 312 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 OR52B6Q8NGF0 335 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 ZNF473Q8WTR7 871 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 APOBEC4Q8WW27 367 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 CCT6BQ92526 530 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 EXTL1Q92935 676 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 MS4A6EQ96DS6 147 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 SMIM10Q96HG1 83 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 OR1F2PQ96R84 312 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 CRB3Q9BUF7 120 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 MS4A8Q9BY19 250 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 IQCGQ9H095 443 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 SOX17Q9H6I2 414 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 NOL11Q9H8H0 719 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 CLK4Q9HAZ1 481 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 ZBTB26Q9HCK0 441 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 SENP1Q9P0U3 644 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 STK38LQ9Y2H1 464 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 PCDHGA11Q9Y5H2 935 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 KCNMB2Q9Y691 235 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 SPTA1P02549 2419 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 CFAP46Q8IYW2 2715 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 SMG1Q96Q15 3661 aaKnown RBP11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 ZNF860A6NHJ4 632 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 G3V2L1 256 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 FFAR3O14843 346 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 GPR42O15529 346 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 ERI3O43414 337 aaKnown RBP11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 TBX6O95947 436 aaPredicted RBP11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 PCNAP12004 261 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 IL10P22301 178 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 ARL1P40616 181 aaPredicted RBP11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 CCR10P46092 362 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 XCR1P46094 333 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 RRADP55042 308 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 POLE2P56282 527 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 FOXL2P58012 376 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 MAT1AQ00266 395 aaKnown RBP11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 TGM3Q08188 693 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 ATP1A4Q13733 1029 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 RBBP7Q16576 425 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 SYT16Q17RD7 645 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 LINC00303Q3SY05 128 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 TMEM35AQ53FP2 167 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 TRIM40Q6P9F5 258 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 PCSK4Q6UW60 755 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 LRIG3Q6UXM1 1119 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 IQCKQ8N0W5 287 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 BANPQ8N9N5 519 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 OR51Q1Q8NH59 317 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 VPS50Q96JG6 964 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 ZNF382Q96SR6 550 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 ARHGAP9Q9BRR9 750 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 REXO4Q9GZR2 422 aaKnown RBP11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 ADNPQ9H2P0 1102 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 KLHL31Q9H511 634 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 SEMA4BQ9NPR2 832 aaPredicted RBP11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 DMRT3Q9NQL9 472 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 HCN3Q9P1Z3 774 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 TUBD1Q9UJT1 453 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 C3orf18Q9UK00 162 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 PPT2Q9UMR5 302 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 HS3ST3B1Q9Y662 390 aa11.08□□□□□ -0.64
TRAFD1-209ENST00000552896 A0A1W2PQ72 361 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 IDSB3KWA1 339 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 AGPSO00116 658 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 SOCS6O14544 535 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 SUPT7LO94864 414 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 BMP10O95393 424 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 MLYCDO95822 493 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 IMPDH1P20839 514 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 ARFIP1P53367 373 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 DNAJB13P59910 316 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 RAB8AP61006 207 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 CLCQ05315 142 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 LCP2Q13094 533 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 CPSF6Q16630 551 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 UNC50Q53HI1 259 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 VWA2Q5GFL6 755 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 BEND6Q5SZJ8 279 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 CPZQ66K79 652 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 LETMD1Q6P1Q0 360 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 ABHD17CQ6PCB6 329 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 SHISA6Q6ZSJ9 500 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 MED25Q71SY5 747 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 RPS27LQ71UM5 84 aaKnown RBP11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 TMEM151BQ8IW70 566 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 PRSS58Q8IYP2 241 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 EFCAB3Q8N7B9 438 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 TMEM102Q8N9M5 508 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 SRFBP1Q8NEF9 429 aaKnown RBP11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 MYRIPQ8NFW9 859 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 HUS1BQ8NHY5 278 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 WDR20Q8TBZ3 569 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 ADAMTS18Q8TE60 1221 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 PPP4R1Q8TF05 950 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 ATP6V1E2Q96A05 226 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms