RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TDRD6O60522 2096 aaKnown RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 CAPN5O15484 640 aaPredicted RBP10.99□□□□□ -0.65
RAB5C-208ENST00000551338 OR1F1O43749 312 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 CLEC3AO75596 197 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 APBB3O95704 486 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 HPRP00739 348 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 CST1P01037 141 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 KDELR2P33947 212 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 CAPGP40121 348 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 IST1P53990 364 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 ADARB1P78563 741 aaKnown RBP10.99□□□□□ -0.65
RAB5C-208ENST00000551338 SMAD4Q13485 552 aaKnown RBP10.99□□□□□ -0.65
RAB5C-208ENST00000551338 VEZF1Q14119 521 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 RGNQ15493 299 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 ZIC1Q15915 447 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.99□□□□□ -0.65
RAB5C-208ENST00000551338 CCNYL2Q5T2Q4 361 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 ABRAXAS1Q6UWZ7 409 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 WASH2PQ6VEQ5 465 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 CBLL1Q75N03 491 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 EIF3MQ7L2H7 374 aaKnown RBP10.99□□□□□ -0.65
RAB5C-208ENST00000551338 ADCK2Q7Z695 626 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 TMEM179BQ7Z7N9 219 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 NUDT13Q86X67 352 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 FBXL6Q8N531 539 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 OR52N2Q8NGI0 321 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 OR10Q1Q8NGQ4 319 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 CCL4L1Q8NHW4 92 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 CREB3L4Q8TEY5 395 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 FAM3CQ92520 227 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 TM4SF18Q96CE8 201 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 FBXL20Q96IG2 436 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 TRAPPC9Q96Q05 1148 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 MYCBPQ99417 103 aaPredicted RBP10.99□□□□□ -0.65
RAB5C-208ENST00000551338 SLC35A5Q9BS91 424 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 MRPS26Q9BYN8 205 aaKnown RBP10.99□□□□□ -0.65
RAB5C-208ENST00000551338 EPS8L2Q9H6S3 715 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 MRPS30Q9NP92 439 aaKnown RBP10.99□□□□□ -0.65
RAB5C-208ENST00000551338 GPATCH2Q9NW75 528 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 VNN3Q9NY84 501 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 SPHK1Q9NYA1 384 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 USE1Q9NZ43 259 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 USP36Q9P275 1121 aaKnown RBP10.99□□□□□ -0.65
RAB5C-208ENST00000551338 SPASTQ9UBP0 616 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 TBC1D29Q9UFV1 150 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 EBF1Q9UH73 591 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 ACSL6Q9UKU0 697 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 SAMD4AQ9UPU9 718 aaKnown RBP10.99□□□□□ -0.65
RAB5C-208ENST00000551338 HEBP2Q9Y5Z4 205 aa10.99□□□□□ -0.65
RAB5C-208ENST00000551338 SCN3AQ9NY46 2000 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 EME2A4GXA9 379 aaPredicted RBP10.98□□□□□ -0.65
RAB5C-208ENST00000551338 A6NCN8 305 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 LRRC72A6NJI9 287 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 C4orf51C9J302 202 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 H3BNH8 94 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 HAT1O14929 419 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 TMPRSS11DO60235 418 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 TNFRSF21O75509 655 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 SNAP29O95721 258 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 ZNF682O95780 498 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 GNAO1P09471 354 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 HOXB3P14651 431 aaPredicted RBP10.98□□□□□ -0.65
RAB5C-208ENST00000551338 GLULP15104 373 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 HOXB6P17509 224 aaKnown RBP10.98□□□□□ -0.65
RAB5C-208ENST00000551338 NELFEP18615 380 aaKnown RBP10.98□□□□□ -0.65
RAB5C-208ENST00000551338 DDCP20711 480 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 IGFBP4P22692 258 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 BCL6P41182 706 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 GSTM5P46439 218 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 ALDH3A2P51648 485 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 CRYBA2P53672 197 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 MAPK12P53778 367 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 ARSFP54793 590 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 ABATP80404 500 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 VAC14Q08AM6 782 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 KRT33BQ14525 404 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 ALG11Q2TAA5 492 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 CYBRD1Q53TN4 286 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 COX20Q5RI15 118 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 USP51Q70EK9 711 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 PAGE2Q7Z2X7 111 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 ZDHHC21Q8IVQ6 265 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 SVOPLQ8N434 492 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 DHRSXQ8N5I4 330 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 AMER3Q8N944 861 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 OR2L3Q8NG85 312 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 OR5K1Q8NHB7 308 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 MAGEE2Q8TD90 523 aaPredicted RBP10.98□□□□□ -0.65
RAB5C-208ENST00000551338 TSACCQ96A04 125 aaPredicted RBP10.98□□□□□ -0.65
RAB5C-208ENST00000551338 MSANTD3Q96H12 275 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 ZNF764Q96H86 408 aaPredicted RBP10.98□□□□□ -0.65
RAB5C-208ENST00000551338 SLC6A16Q9GZN6 736 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 FAM192AQ9GZU8 254 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 TWSG1Q9GZX9 223 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 SOX17Q9H6I2 414 aaPredicted RBP10.98□□□□□ -0.65
RAB5C-208ENST00000551338 CAAP1Q9H8G2 361 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 SYNPO2LQ9H987 977 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 CD320Q9NPF0 282 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 MIEF1Q9NQG6 463 aa10.98□□□□□ -0.65
RAB5C-208ENST00000551338 TMEM184CQ9NVA4 438 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms