RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TRIM45Q9H8W5 580 aaPredicted RBP21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 ASIC3Q9UHC3 531 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 ITGB1BP2Q9UKP3 347 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 APCP25054 2843 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 TFECO14948 347 aaPredicted RBP21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 CLCN2P51788 898 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 RIPPLY3P57055 190 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 CATSPEREQ5SY80 951 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 RNASEH2BQ5TBB1 312 aaKnown RBP21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 DOLPP1Q86YN1 238 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 TMEM156Q8N614 296 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 NEIL2Q969S2 332 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 CERS2Q96G23 380 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 FAR2Q96K12 515 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 SPOCK3Q9BQ16 436 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 PELI2Q9HAT8 420 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 PPT2Q9UMR5 302 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 CACNA1CQ13936 2221 aa21.61■■□□□ 1.05
SMARCD1-209ENST00000550477 H2AFYO75367 372 aaKnown RBP21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 GABRB3P28472 473 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 TRHRP34981 398 aaPredicted RBP21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 HNF4AP41235 474 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 ITGA8P53708 1063 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 RAB8AP61006 207 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 BTG2P78543 158 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 HECTD2Q5U5R9 776 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 TMEM211Q6ICI0 200 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 KIF2BQ8N4N8 673 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 CPSF7Q8N684 471 aaKnown RBP21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 ACTRT1Q8TDG2 376 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 C14orf79Q96F83 325 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 OR4K3Q96R72 315 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 CCDC77Q9BR77 488 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 RHBGQ9H310 441 aa21.6■■□□□ 1.05
SMARCD1-209ENST00000550477 TEP1Q99973 2627 aaKnown RBP21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 A0A088AWK7 358 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 TCRBV16S1A1N1A0A5B0 115 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 CLDN4O14493 209 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 DNALI1O14645 258 aaPredicted RBP21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 SERPINA6P08185 405 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 ZNF10P21506 573 aaPredicted RBP21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 HPDP32754 393 aaPredicted RBP21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 PTGS2P35354 604 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 STXBP1P61764 594 aaKnown RBP21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 BBS9Q3SYG4 887 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 ZNF468Q5VIY5 522 aaPredicted RBP21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 THOC6Q86W42 341 aaKnown RBP21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 PDIK1LQ8N165 341 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 TTLQ8NG68 377 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 SDCCAG3Q96C92 435 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 PDLIM5Q96HC4 596 aaKnown RBP21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 TSNARE1Q96NA8 513 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 FBXW2Q9UKT8 454 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 MMACHCQ9Y4U1 282 aa21.59■■□□□ 1.05
SMARCD1-209ENST00000550477 SYNDIG1LA6NDD5 238 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 USP27XA6NNY8 438 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 FANCGO15287 622 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 TPOP07202 933 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 MAOAP21397 527 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 MEOX1P50221 254 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 REEP5Q00765 189 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 TEDDM1Q5T9Z0 273 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 PAOXQ6QHF9 649 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 NXPE4Q6UWF7 544 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 TMPRSS11BQ86T26 416 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 ZNF295-AS1Q8N0V1 137 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 NKAPQ8N5F7 415 aaKnown RBP21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 ANKRD7Q92527 254 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 SLC6A16Q9GZN6 736 aa21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 MRPS33Q9Y291 106 aaKnown RBP21.58■■□□□ 1.05
SMARCD1-209ENST00000550477 A8MUA0 341 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 B3GALT4O96024 378 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 KIR3DL1P43629 444 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 HNMTP50135 292 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 HSF1Q00613 529 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 TERF2Q15554 542 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 CYP4Z2PQ8N1L4 340 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 B3GNT7Q8NFL0 401 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 ASB5Q8WWX0 329 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 EGFL8Q99944 293 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 ZFATQ9P243 1243 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 SLC22A14Q9Y267 594 aa21.57■■□□□ 1.04
SMARCD1-209ENST00000550477 IGKV3D-11A0A0A0MRZ8 115 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 TRBV11-1A0A0K0K1C0 115 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 C19orf84I3L1E1 186 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 PEX1O43933 1283 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 CDC40O60508 579 aaKnown RBP eCLIP21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 DNAJB6O75190 326 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 SAT1P21673 171 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 BTN3A2P78410 334 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 TOR1AIP1Q5JTV8 583 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 SULF2Q8IWU5 870 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 ARMC10Q8N2F6 343 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 NFAM1Q8NET5 270 aaPredicted RBP21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 FAM57AQ8TBR7 257 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 VMP1Q96GC9 406 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 OSBPL9Q96SU4 736 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 NPLQ9BXD5 320 aaPredicted RBP21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 CAPS2Q9BXY5 557 aa21.56■■□□□ 1.04
SMARCD1-209ENST00000550477 TIMMDC1Q9NPL8 285 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms