RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 C4orf51C9J302 202 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 RIPK2O43353 540 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 ERI3O43414 337 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 CHST10O43529 356 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 CDC123O75794 336 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 SERPINA7P05543 415 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 FHP07954 510 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 PRR35P0CG20 571 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 RNH1P13489 461 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 EPB42P16452 691 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 CD22P20273 847 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 ZNF10P21506 573 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 HNRNPH1P31943 449 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 CD97P48960 835 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 OLR1P78380 273 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 FOXK1P85037 733 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 NAA30Q147X3 362 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 ABRAXAS2Q15018 415 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 HIST2H2ACQ16777 129 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 PFKFB4Q16877 469 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 TEX35Q5T0J7 233 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 HIST2H2AA3Q6FI13 130 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 RIPOR1Q6ZS17 1223 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 SHISA5Q8N114 240 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 UBE2E3Q969T4 207 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 FAR2Q96K12 515 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 GPR78Q96P69 363 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 TUBB6Q9BUF5 446 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 AICDAQ9GZX7 198 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 KLHL31Q9H511 634 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 EPS8L2Q9H6S3 715 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 LANCL2Q9NS86 450 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 CPSF2Q9P2I0 782 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 B3GNT3Q9Y2A9 372 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 ANGPTL3Q9Y5C1 460 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 LRIT2A6NDA9 550 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 MAGEB17A8MXT2 336 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 PSMD12O00232 456 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 SEC24DO94855 1032 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 UQCRHP07919 91 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 SNRPAP09012 282 aaKnown RBP16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 FAM153BP0C7A2 387 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 SMIM10L1P0DMW3 83 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 COL6A2P12110 1019 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 CASP2P42575 452 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 PIK3CGP48736 1102 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 RHAGQ02094 409 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 KCNC4Q03721 635 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 E2F2Q14209 437 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 FAM153CQ494X1 144 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 LGSNQ5TDP6 509 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 TRIM40Q6P9F5 258 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 ISLR2Q6UXK2 745 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 VN1R5Q7Z5H4 357 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 CPEB2Q7Z5Q1 589 aaKnown RBP16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 ANKRD37Q7Z713 158 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 GSPT2Q8IYD1 628 aaKnown RBP16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 TEX9Q8N6V9 391 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 EIF1ADQ8N9N8 165 aaKnown RBP16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 MS4A6EQ96DS6 147 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 SMIM10Q96HG1 83 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 SCYL1Q96KG9 808 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 WDR77Q9BQA1 342 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 ILKAPQ9H0C8 392 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 RHBGQ9H310 441 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 CLMPQ9H6B4 373 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 SLAMF7Q9NQ25 335 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 LUZP4Q9P127 313 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 LRRK2Q5S007 2527 aa16.24■□□□□ 0.19
CHMP1A-208ENST00000550102 KLK8O60259 260 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 RBP1P09455 135 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 ICAM2P13598 275 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 SERPINB1P30740 379 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 MLLT10P55197 1068 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 BTN3A2P78410 334 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 PCDH1Q08174 1060 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 TGM3Q08188 693 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 MFAP5Q13361 173 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 NSDHLQ15738 373 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 ADPRMQ3LIE5 342 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 CRB2Q5IJ48 1285 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 ADNP2Q6IQ32 1131 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 GRHL2Q6ISB3 625 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 METTL2BQ6P1Q9 378 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 MED27Q6P2C8 311 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 PLD6Q8N2A8 252 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 EFCAB3Q8N7B9 438 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 Q8NA96 180 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 OR2L5Q8NG80 312 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 PPP4R1Q8TF05 950 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 MIB2Q96AX9 1013 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 MTBPQ96DY7 904 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 TXLNGYQ9BZA5 131 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 REXO4Q9GZR2 422 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 COPS7BQ9H9Q2 264 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 ZBTB20Q9HC78 741 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 PRM3Q9NNZ6 103 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 XPR1Q9UBH6 696 aa16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 ZNF490Q9ULM2 529 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 TMCO1Q9UM00 188 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms