RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 CD96P40200 585 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 HNF4AP41235 474 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 ST13P50502 369 aaKnown RBP12.6□□□□□ -0.39
GCN1-206ENST00000549815 PER3P56645 1201 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 SKP1P63208 163 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 POU4F1Q01851 419 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 ACTN3Q08043 901 aaPredicted RBP12.6□□□□□ -0.39
GCN1-206ENST00000549815 RBBP5Q15291 538 aaKnown RBP12.6□□□□□ -0.39
GCN1-206ENST00000549815 TGFBIQ15582 683 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 MYO7BQ6PIF6 2116 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 GFRALQ6UXV0 394 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 CAPN12Q6ZSI9 719 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 CYS1Q717R9 158 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 LURAP1LQ8IV03 231 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.6□□□□□ -0.39
GCN1-206ENST00000549815 CA13Q8N1Q1 262 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 KIF2BQ8N4N8 673 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 BBOF1Q8ND07 529 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 NFAM1Q8NET5 270 aaPredicted RBP12.6□□□□□ -0.39
GCN1-206ENST00000549815 PTCHD1Q96NR3 888 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 EGFL8Q99944 293 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 ERP44Q9BS26 406 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 HES7Q9BYE0 225 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 CAB39LQ9H9S4 337 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 NECTIN3Q9NQS3 549 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 ANKRD10Q9NXR5 420 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 GRHL1Q9NZI5 618 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 WHRNQ9P202 907 aa12.6□□□□□ -0.39
GCN1-206ENST00000549815 GABRR3A8MPY1 467 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 FAM227AF5H4B4 570 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 EIF3HO15372 352 aaKnown RBP eCLIP12.59□□□□□ -0.395e-6■■□□□ 13.1
GCN1-206ENST00000549815 RAD51CO43502 376 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 PRMT3O60678 531 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 PRAMEF4O60810 478 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 NEURL1O76050 574 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 WDR47O94967 919 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 UNC5CO95185 931 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 MYBL2P10244 700 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 CD1DP15813 335 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 GNAZP19086 355 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 MAOAP21397 527 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 GGT5P36269 586 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 ILF2Q12905 390 aaKnown RBP12.59□□□□□ -0.39
GCN1-206ENST00000549815 SLBPQ14493 270 aaKnown RBP eCLIP12.59□□□□□ -0.39
GCN1-206ENST00000549815 OR1C1Q15619 314 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 ZKSCAN8Q15776 578 aaPredicted RBP12.59□□□□□ -0.39
GCN1-206ENST00000549815 TOR1AIP1Q5JTV8 583 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 ZNF468Q5VIY5 522 aaPredicted RBP12.59□□□□□ -0.39
GCN1-206ENST00000549815 PRAMEF9Q5VWM5 478 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 SPINK14Q6IE38 97 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 FRA10AC1Q70Z53 315 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 ZNF227Q86WZ6 799 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 SPATA6LQ8N4H0 392 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 SLC5A8Q8N695 610 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 SPATA4Q8NEY3 305 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 PYROXD1Q8WU10 500 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 GPR22Q99680 433 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 UTP23Q9BRU9 249 aaKnown RBP12.59□□□□□ -0.39
GCN1-206ENST00000549815 UNKQ9C0B0 810 aaKnown RBP12.59□□□□□ -0.39
GCN1-206ENST00000549815 DPH5Q9H2P9 285 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 NT5DC2Q9H857 520 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 SAYSD1Q9NPB0 183 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 PRDM9Q9NQV7 894 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 SEC14L3Q9UDX4 400 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 CLDN16Q9Y5I7 305 aa12.59□□□□□ -0.39
GCN1-206ENST00000549815 TCRBV9S1A1TA0A576 114 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 SAGE2PA6NJ88 616 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 FAM159BA6NKW6 160 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 CDK2AP1O14519 115 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 PHGDHO43175 533 aaKnown RBP12.58□□□□□ -0.4
GCN1-206ENST00000549815 RNH1P13489 461 aaKnown RBP12.58□□□□□ -0.4
GCN1-206ENST00000549815 HNRNPH1P31943 449 aaKnown RBP12.58□□□□□ -0.4
GCN1-206ENST00000549815 GPX6P59796 221 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 RUNX2Q13950 521 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 ADPRMQ3LIE5 342 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 TMIGD1Q6UXZ0 262 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 VN1R5Q7Z5H4 357 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 SCUBE1Q8IWY4 988 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 ARMC10Q8N2F6 343 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 GAL3ST3Q96A11 431 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 MS4A6EQ96DS6 147 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 WDR34Q96EX3 536 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 SEC16BQ96JE7 1060 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 QRFPRQ96P65 431 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 RBBP8Q99708 897 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 CDCP1Q9H5V8 836 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 TRIM45Q9H8W5 580 aaPredicted RBP12.58□□□□□ -0.4
GCN1-206ENST00000549815 GPRC5BQ9NZH0 403 aa12.58□□□□□ -0.4
GCN1-206ENST00000549815 LRBAP50851 2863 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 LRIT2A6NDA9 550 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 NCF1BA6NI72 391 aaPredicted RBP12.57□□□□□ -0.4
GCN1-206ENST00000549815 NCF1CA8MVU1 366 aaPredicted RBP12.57□□□□□ -0.4
GCN1-206ENST00000549815 TGFBR3LH3BV60 316 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 CCDC166P0CW27 439 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 NCF1P14598 390 aaPredicted RBP12.57□□□□□ -0.4
GCN1-206ENST00000549815 EPORP19235 508 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 GSTM2P28161 218 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 TPP2P29144 1249 aaPredicted RBP12.57□□□□□ -0.4
GCN1-206ENST00000549815 GP5P40197 560 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 CA7P43166 264 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms