RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 ACTN3Q08043 901 aaPredicted RBP18.35■□□□□ 0.53
ATF1-202ENST00000549612 FCRLBQ6BAA4 426 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 MAMDC2Q7Z304 686 aaPredicted RBP18.35■□□□□ 0.53
ATF1-202ENST00000549612 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.35■□□□□ 0.532e-6■■■■■ 163.7
ATF1-202ENST00000549612 BEST3Q8N1M1 668 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 SPATA6LQ8N4H0 392 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 TTLQ8NG68 377 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 SUN3Q8TAQ9 357 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 SEC16BQ96JE7 1060 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 UBXN10Q96LJ8 280 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 NPAS2Q99743 824 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 TMEM79Q9BSE2 394 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 UNKQ9C0B0 810 aaKnown RBP18.35■□□□□ 0.53
ATF1-202ENST00000549612 GPRC5BQ9NZH0 403 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 ABI3Q9P2A4 366 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 OSGIN2Q9Y236 505 aa18.35■□□□□ 0.53
ATF1-202ENST00000549612 IGKV3D-11A0A0A0MRZ8 115 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 NCF1BA6NI72 391 aaPredicted RBP18.34■□□□□ 0.53
ATF1-202ENST00000549612 NCF1CA8MVU1 366 aaPredicted RBP18.34■□□□□ 0.53
ATF1-202ENST00000549612 TAPBPO15533 448 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 B4GALT2O60909 372 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 H2AFYO75367 372 aaKnown RBP18.34■□□□□ 0.53
ATF1-202ENST00000549612 CLDN1O95832 211 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 RNH1P13489 461 aaKnown RBP18.34■□□□□ 0.53
ATF1-202ENST00000549612 NCF1P14598 390 aaPredicted RBP18.34■□□□□ 0.53
ATF1-202ENST00000549612 GSTM2P28161 218 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 PLTPP55058 493 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 SLC26A5P58743 744 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 STXBP1P61764 594 aaKnown RBP18.34■□□□□ 0.53
ATF1-202ENST00000549612 SLBPQ14493 270 aaKnown RBP eCLIP18.34■□□□□ 0.53
ATF1-202ENST00000549612 MEP1AQ16819 746 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 TOR1AIP1Q5JTV8 583 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 TMIGD1Q6UXZ0 262 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 ZNF572Q7Z3I7 529 aaPredicted RBP18.34■□□□□ 0.53
ATF1-202ENST00000549612 GPSM1Q86YR5 675 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 CRLF3Q8IUI8 442 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 LGI4Q8N135 537 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 C17orf53Q8N3J3 647 aaPredicted RBP18.34■□□□□ 0.53
ATF1-202ENST00000549612 DNAJB8Q8NHS0 232 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 FBXO25Q8TCJ0 367 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 CAPS2Q9BXY5 557 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 PITHD1Q9GZP4 211 aaPredicted RBP18.34■□□□□ 0.53
ATF1-202ENST00000549612 RAB17Q9H0T7 212 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 EHD1Q9H4M9 534 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 NT5DC2Q9H857 520 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 CNOT10Q9H9A5 744 aaKnown RBP18.34■□□□□ 0.53
ATF1-202ENST00000549612 PCDHGB6Q9Y5F9 930 aa18.34■□□□□ 0.53
ATF1-202ENST00000549612 PRMT3O60678 531 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 RASAL1O95294 804 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 CRYABP02511 175 aaKnown RBP18.33■□□□□ 0.52
ATF1-202ENST00000549612 STSP08842 583 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 RAB10P61026 200 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 BTG2P78543 158 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 TUBA3CQ13748 450 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 OR4D1Q15615 310 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 SULT1C3Q6IMI6 304 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 TUBA3EQ6PEY2 450 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 ZDHHC24Q6UX98 284 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 SYT10Q6XYQ8 523 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 ZGRF1Q86YA3 2104 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 KRT78Q8N1N4 520 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 CA13Q8N1Q1 262 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 SLC5A8Q8N695 610 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 PDPRQ8NCN5 879 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 ELP5Q8TE02 316 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 GAL3ST3Q96A11 431 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 PTCHD1Q96NR3 888 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 DNAJC11Q9NVH1 559 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 WWOXQ9NZC7 414 aa18.33■□□□□ 0.52
ATF1-202ENST00000549612 TCRBV16S1A1N1A0A5B0 115 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 PSMD12O00232 456 aaPredicted RBP18.32■□□□□ 0.52
ATF1-202ENST00000549612 LRRTM2O43300 516 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 MAN1A2O60476 641 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 HNRNPH1P31943 449 aaKnown RBP18.32■□□□□ 0.52
ATF1-202ENST00000549612 SPRP35270 261 aaPredicted RBP18.32■□□□□ 0.52
ATF1-202ENST00000549612 TAS2R50P59544 299 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 KBTBD12Q3ZCT8 623 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 ZNF766Q5HY98 468 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 GRTP1Q5TC63 336 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 CTAGE3PQ8IX95 158 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 MDS2Q8NDY4 140 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 KIAA1191Q96A73 305 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 MS4A6EQ96DS6 147 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 WDR34Q96EX3 536 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 PRDM9Q9NQV7 894 aa18.32■□□□□ 0.52
ATF1-202ENST00000549612 PTBP2Q9UKA9 531 aaKnown RBP18.32■□□□□ 0.52
ATF1-202ENST00000549612 LRIT2A6NDA9 550 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 FAM227AF5H4B4 570 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 PRAMEF4O60810 478 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 CLEC3AO75596 197 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 STK16O75716 305 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 MAOAP21397 527 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 STX2P32856 288 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 MAGEA4P43358 317 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 HSPA7P48741 367 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 PER3P56645 1201 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 BTN3A2P78410 334 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 TRADDQ15628 312 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 ADPRMQ3LIE5 342 aa18.31■□□□□ 0.52
ATF1-202ENST00000549612 PRAMEF9Q5VWM5 478 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms