RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 NDUFS2O75306 463 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 SERPINA1P01009 418 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 UQCRC2P22695 453 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 DCTP40126 519 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 GABARAPL2P60520 117 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 TEKQ02763 1124 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 HYAL2Q12891 473 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 SGCGQ13326 291 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 PRSS53Q2L4Q9 553 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 HABP4Q5JVS0 413 aaKnown RBP9.54□□□□□ -0.88
RAB5B-206ENST00000549505 LMNTD1Q8N9Z9 388 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 NT5CQ8TCD5 201 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 FIG4Q92562 907 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 FAM162AQ96A26 154 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 SH3KBP1Q96B97 665 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 NEURL3Q96EH8 262 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 CNBD2Q96M20 576 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 TUBA1CQ9BQE3 449 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 CHCHD3Q9NX63 227 aaKnown RBP9.54□□□□□ -0.88
RAB5B-206ENST00000549505 TAS2R9Q9NYW1 312 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 MTCH2Q9Y6C9 303 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 DGKBQ9Y6T7 804 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 CHD7Q9P2D1 2997 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 FAM221BA6H8Z2 402 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 SAC3D1A6NKF1 404 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 CHURC1-FNTBB4DL54 471 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 M0QX08 132 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 VILLO15195 856 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 AHCYL1O43865 530 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 CLPTM1O96005 669 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 HMGA2P52926 109 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 KCNJ10P78508 379 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 CCINQ13939 588 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 SIM2Q14190 667 aaPredicted RBP9.54□□□□□ -0.88
RAB5B-206ENST00000549505 RPE65Q16518 533 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 ZNF630Q2M218 657 aaPredicted RBP9.54□□□□□ -0.88
RAB5B-206ENST00000549505 EOGTQ5NDL2 527 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 RBM48Q5RL73 367 aaKnown RBP9.54□□□□□ -0.88
RAB5B-206ENST00000549505 TTC23Q5W5X9 447 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 SLC30A9Q6PML9 568 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.54□□□□□ -0.88
RAB5B-206ENST00000549505 CLECL1Q8IZS7 167 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 TRIML2Q8N7C3 387 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 APOBEC4Q8WW27 367 aaKnown RBP9.54□□□□□ -0.88
RAB5B-206ENST00000549505 TM7SF3Q9NS93 570 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 THUMPD1Q9NXG2 353 aaKnown RBP9.54□□□□□ -0.88
RAB5B-206ENST00000549505 OR6C2Q9NZP2 312 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 TAAR2Q9P1P5 351 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 PCDHGA2Q9Y5H1 932 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 COMMD3-BMI1R4GMX3 469 aa9.54□□□□□ -0.88
RAB5B-206ENST00000549505 G3V2T6 193 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 RFXAPO00287 272 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 PCDH8O95206 1070 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 B3GALT4O96024 378 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 ARAFP10398 606 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 THRBP10828 461 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 LIMS1P48059 325 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 KEAP1Q14145 624 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 CLCA4Q14CN2 919 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 CCNYL2Q5T2Q4 361 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 RNF220Q5VTB9 566 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 KDM4DQ6B0I6 523 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 TMEM64Q6YI46 380 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 ZDHHC13Q8IUH4 622 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 MFSD9Q8NBP5 474 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 TMEM145Q8NBT3 493 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 TSPAN14Q8NG11 270 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 PPCDCQ96CD2 204 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 THAP11Q96EK4 314 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 RMND5BQ96G75 393 aaPredicted RBP9.53□□□□□ -0.88
RAB5B-206ENST00000549505 PITX2Q99697 317 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 DOK1Q99704 481 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 AICDAQ9GZX7 198 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 ENAMQ9NRM1 1142 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 MMP17Q9ULZ9 603 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 DMTF1Q9Y222 760 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 PRSS38A1L453 326 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 FAM149AA5PLN7 773 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 PDLIM1O00151 329 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 JRKO75564 520 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 KRT75O95678 551 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 CPNE6O95741 557 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 TIE1P35590 1138 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 SOX9P48436 509 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 HLCSP50747 726 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 HBA1P69905 142 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 TSEN54Q7Z6J9 526 aaKnown RBP9.53□□□□□ -0.88
RAB5B-206ENST00000549505 ABI3BPQ7Z7G0 1075 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 TDHQ8IZJ6 230 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 MIPOL1Q8TD10 442 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 HDAC2Q92769 488 aaKnown RBP9.53□□□□□ -0.88
RAB5B-206ENST00000549505 RGMAQ96B86 450 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 PDXPQ96GD0 296 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 MRGPRX1Q96LB2 322 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 FAM210AQ96ND0 272 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 OR2M4Q96R27 311 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 DNAAF2Q9NVR5 837 aaKnown RBP9.53□□□□□ -0.88
RAB5B-206ENST00000549505 NTMQ9P121 344 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 NCKAP1Q9Y2A7 1128 aa9.53□□□□□ -0.88
RAB5B-206ENST00000549505 DNAJB5O75953 348 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms