RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SUV39H1O43463 412 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 RASGRP1O95267 797 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 SLC5A2P31639 672 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 SSR2P43308 183 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 PXNP49023 591 aaPredicted RBP12.18□□□□□ -0.46
SCAF11-209ENST00000547018 CDH12P55289 794 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 CSTF3Q12996 717 aaKnown RBP12.18□□□□□ -0.46
SCAF11-209ENST00000547018 SPRED1Q7Z699 444 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 GALNT13Q8IUC8 556 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 GTPBP3Q969Y2 492 aaKnown RBP12.18□□□□□ -0.46
SCAF11-209ENST00000547018 OR52A5Q9H2C5 316 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 PHPT1Q9NRX4 125 aaPredicted RBP12.18□□□□□ -0.46
SCAF11-209ENST00000547018 TEX10Q9NXF1 929 aaPredicted RBP12.18□□□□□ -0.46
SCAF11-209ENST00000547018 TMED5Q9Y3A6 229 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 A0A087WXM4 84 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 H0YIV9 168 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 PRAMEF10O60809 474 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 KELP23276 732 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 CLCA4Q14CN2 919 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 GGTA1PQ4G0N0 100 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 PTOV1Q86YD1 416 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 DCUN1D3Q8IWE4 304 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 ZZZ3Q8IYH5 903 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 TMEFF1Q8IYR6 380 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 ANKRD53Q8N9V6 530 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 PATE1Q8WXA2 126 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 SIPA1Q96FS4 1042 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 EFCAB11Q9BUY7 163 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 SLC17A9Q9BYT1 436 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 TRIT1Q9H3H1 467 aaKnown RBP12.18□□□□□ -0.46
SCAF11-209ENST00000547018 REEP4Q9H6H4 257 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 CXorf21Q9HAI6 301 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 FAM118AQ9NWS6 357 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 GDE1Q9NZC3 331 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 KLHL42Q9P2K6 505 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 EXO1Q9UQ84 846 aaKnown RBP12.18□□□□□ -0.46
SCAF11-209ENST00000547018 PCDHB11Q9Y5F2 797 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 KIF26AQ9ULI4 1882 aaPredicted RBP12.18□□□□□ -0.46
SCAF11-209ENST00000547018 C5orf67F2Z3F1 127 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 SCN2BO60939 215 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 RNGTTO60942 597 aaKnown RBP12.17□□□□□ -0.46
SCAF11-209ENST00000547018 EGFP01133 1207 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 FABP3P05413 133 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 ACADMP11310 421 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 RRM2P31350 389 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 ACSL1P33121 698 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 NUDT6P53370 316 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 RAPSNQ13702 412 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 RGNQ15493 299 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 PATL1Q86TB9 770 aaKnown RBP12.17□□□□□ -0.46
SCAF11-209ENST00000547018 CYP4Z1Q86W10 505 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 NLRP8Q86W28 1048 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 OR8K5Q8NH50 307 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 ZCCHC10Q8TBK6 192 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 TESCQ96BS2 214 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 ROGDIQ9GZN7 287 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 MUC13Q9H3R2 512 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 REEP1Q9H902 201 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 VCX3AQ9NNX9 186 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 ITM2CQ9NQX7 267 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 CNOT11Q9UKZ1 510 aaKnown RBP12.17□□□□□ -0.46
SCAF11-209ENST00000547018 C2orf16Q68DN1 1984 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 SMIM31A0A1B0GVY4 71 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 TSPAN11A1L157 253 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 ZNF860A6NHJ4 632 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 VIPP01282 170 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 FEN1P39748 380 aaKnown RBP12.17□□□□□ -0.46
SCAF11-209ENST00000547018 RFX3P48380 749 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 CD47Q08722 323 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 TMEM196Q5HYL7 178 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 OR2T5Q6IEZ7 315 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 B3GNT6Q6ZMB0 384 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 NEK10Q6ZWH5 1172 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 FAM9CQ8IZT9 166 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 KRT78Q8N1N4 520 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 OR2T29Q8NH02 315 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 CHTF18Q8WVB6 975 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 REPS1Q96D71 796 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 ARSGQ96EG1 525 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 KLHL31Q9H511 634 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 GORASP2Q9H8Y8 452 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 FGF22Q9HCT0 170 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 SPHK1Q9NYA1 384 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-209ENST00000547018 A0A1W2PPW3 197 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 A0A1W2PS29 197 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 C5orf58C9J3I9 102 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 MYF6P23409 242 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 ACTR1BP42025 376 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 ACTR1AP61163 376 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 ID2Q02363 134 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 SPIN4Q56A73 249 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 THAP5Q7Z6K1 395 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 PDZD3Q86UT5 571 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 GALNT15Q8N3T1 639 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 LINC01555Q8NAE3 123 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 OR5D16Q8NGK9 328 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 DUS3LQ96G46 650 aaKnown RBP12.17□□□□□ -0.46
SCAF11-209ENST00000547018 PDXPQ96GD0 296 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 ZNF514Q96K75 400 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms