RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 MED13Q9UHV7 2174 aa7□□□□□ -1.29
CPSF7-224ENST00000544990 NUP210LQ5VU65 1888 aa7□□□□□ -1.29
CPSF7-224ENST00000544990 SCN3AQ9NY46 2000 aa7□□□□□ -1.29
CPSF7-224ENST00000544990 FLNBO75369 2602 aaKnown RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 A0A087WUV0 522 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 A0A087X1B8 175 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 A0A0A6YYC8 382 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 TRBC2A0A5B9 178 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 CCDC189A1A4V9 331 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 URADA6NGE7 173 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 NCF1BA6NI72 391 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 VSTM2BA6NLU5 285 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 NCF1CA8MVU1 366 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 H0YIG0 161 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 I3L1I5 382 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 AGPSO00116 658 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 PCDH17O14917 1159 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 CLGNO14967 610 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 P2RX6O15547 441 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 KLF4O43474 513 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 FOXS1O43638 330 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 SLC28A2O43868 658 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 LCMT2O60294 686 aaKnown RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 CNOT3O75175 753 aaKnown RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 STK16O75716 305 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 DNAJB5O75953 348 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 IPO13O94829 963 aaKnown RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 MED26O95402 600 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 NSA2O95478 260 aaKnown RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 ACSL3O95573 720 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 SERPIND1P05546 499 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 UMODP07911 640 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 INHBAP08476 426 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 LTA4HP09960 611 aaKnown RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 ZGLP1P0C6A0 271 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 NCF1P14598 390 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 GNAZP19086 355 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 TFEBP19484 476 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 TYK2P29597 1187 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 AHRP35869 848 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 GGT5P36269 586 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 BCL6P41182 706 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 MSH2P43246 934 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 SERPINB9P50453 376 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 PGDP52209 483 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 KLC1Q07866 573 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 RGS1Q08116 209 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 CHAF1BQ13112 559 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 EFTUD2Q15029 972 aaKnown RBP eCLIP6.99□□□□□ -1.291e-7■■■■■ 43.9
CPSF7-224ENST00000544990 RBBP7Q16576 425 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 FAM83EQ2M2I3 478 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 DCAF10Q5QP82 559 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 CATSPEREQ5SY80 951 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 LGSNQ5TDP6 509 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 MROH9Q5TGP6 573 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 CPZQ66K79 652 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 NIPAL1Q6NVV3 410 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 ATG14Q6ZNE5 492 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 ASB18Q6ZVZ8 466 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 VN1R4Q7Z5H5 301 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 CMC1Q7Z7K0 106 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 MRGPREQ86SM8 312 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 TMPRSS11BQ86T26 416 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 PTRH1Q86Y79 214 aaKnown RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 HPS6Q86YV9 775 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 SPATA6LQ8N4H0 392 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 TEX19Q8NA77 164 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 TRPV3Q8NET8 790 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 WFDC12Q8WWY7 111 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 TM4SF19Q96DZ7 209 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 TSNARE1Q96NA8 513 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 OR4K3Q96R72 315 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 CRB3Q9BUF7 120 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 FUT8Q9BYC5 575 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 UNKQ9C0B0 810 aaKnown RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 ANKHQ9HCJ1 492 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 C14orf105Q9NVL8 296 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 P4HTMQ9NXG6 502 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 GPRC5BQ9NZH0 403 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 CTSFQ9UBX1 484 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 ZFP69BQ9UJL9 534 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 SH2B3Q9UQQ2 575 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 TP53TG5Q9Y2B4 290 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 ZNF451Q9Y4E5 1061 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 ACTL7BQ9Y614 415 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 SLC22A7Q9Y694 548 aa6.99□□□□□ -1.29
CPSF7-224ENST00000544990 HELZ2Q9BYK8 2649 aaKnown RBP6.99□□□□□ -1.29
CPSF7-224ENST00000544990 LOC400499M0QZD8 3231 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 IGLV3-12A0A075B6K2 115 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 A0A096LPK6 155 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 A6NL46 340 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 SYCE1LA8MT33 242 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 POC1B-GALNT4F8VUJ3 575 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 NDUFS4O43181 175 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 SUV39H1O43463 412 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 CEACAM4O75871 244 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 KRT38O76015 456 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 STATHP02808 62 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 C2P06681 752 aa6.98□□□□□ -1.29
CPSF7-224ENST00000544990 HEXBP07686 556 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms