RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TSGA13Q96PP4 275 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 SIGLEC12Q96PQ1 595 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 SELENOSQ9BQE4 189 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 HGH1Q9BTY7 390 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 KRTAP9-3Q9BYQ3 159 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 AMBRA1Q9C0C7 1298 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 OR52A5Q9H2C5 316 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 NDST4Q9H3R1 872 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 XKR8Q9H6D3 395 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 PLEKHF2Q9H8W4 249 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 COG4Q9H9E3 785 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 IL26Q9NPH9 171 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 MKKSQ9NPJ1 570 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 HACD3Q9P035 362 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 RWDD2AQ9UIY3 292 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 CDC14AQ9UNH5 594 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 ICKQ9UPZ9 632 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 KLF13Q9Y2Y9 288 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 PKP3Q9Y446 797 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 MAU2Q9Y6X3 613 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 PCM1Q15154 2024 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 DIDO1Q9BTC0 2240 aaKnown RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 A0A0A6YYK5 440 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 TUBAL3A6NHL2 446 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 GABRR3A8MPY1 467 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 PES1O00541 588 aaKnown RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 CLDN4O14493 209 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 BCKDKO14874 412 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 NME2P1O60361 137 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 UGT1A9O60656 530 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 NEURL1O76050 574 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 SEC24DO94855 1032 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 SIX3O95343 332 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 NDST3O95803 873 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 KRT1P04264 644 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 CELA2AP08217 269 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 MMP2P08253 660 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 ANXA5P08758 320 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 CCDC172P0C7W6 258 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 PIRTP0C851 137 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 C8orf89P0DMQ9 161 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 ERVK-10P10266 1014 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 UGT1A6P19224 532 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 MAGP20916 626 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 ACVR2AP27037 513 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 UQCRC1P31930 480 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 PTGER1P34995 402 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 CYB561P49447 251 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 PRLHRP49683 370 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 OGDHQ02218 1023 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 DMTNQ08495 405 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 PRKG2Q13237 762 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 MAMLD1Q13495 774 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 BOP1Q14137 746 aaKnown RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 FASTKQ14296 549 aaKnown RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 KRT81Q14533 505 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 IHHQ14623 411 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 NAA25Q14CX7 972 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 MLC1Q15049 377 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 PAFAH1B3Q15102 231 aaKnown RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 TPD52L1Q16890 204 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 BTBD16Q32M84 506 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 FILIP1LQ4L180 1135 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 CCDC183Q5T5S1 534 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 MBNL2Q5VZF2 373 aaKnown RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 KIAA0930Q6ICG6 404 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 HEPHL1Q6MZM0 1159 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 DPY19L2P1Q6NXN4 242 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 B3GNT6Q6ZMB0 384 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 CYP4V2Q6ZWL3 525 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 DET1Q7L5Y6 550 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 WDR53Q7Z5U6 358 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 YTHDF3Q7Z739 585 aaKnown RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 NT5DC3Q86UY8 548 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 WDR75Q8IWA0 830 aaKnown RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 TBC1D21Q8IYX1 336 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 MCOLN2Q8IZK6 566 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 METTL27Q8N6F8 245 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-220ENST00000544550 OR5AN1Q8NGI8 311 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 C16orf52Q8NHV5 167 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 PPP1R14CQ8TAE6 165 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 FLVCR1-AS1Q8TAF5 88 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 M1APQ8TC57 530 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 ZNF398Q8TD17 642 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 HSPH1Q92598 858 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 ZUFSPQ96AP4 578 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 HIST1H2AHQ96KK5 128 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 IMMP1LQ96LU5 166 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 ZNF285Q96NJ3 590 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 TRIB3Q96RU7 358 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 PCDHB18PQ96TA0 734 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 HIST1H2AJQ99878 128 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 TTYH2Q9BSA4 534 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 SOX7Q9BT81 388 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 HES7Q9BYE0 225 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 UGT1A7Q9HAW7 530 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 UGT1A10Q9HAW8 530 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 UGT1A8Q9HAW9 530 aa3.83□□□□□ -1.8
SNHG1-220ENST00000544550 KCNK13Q9HB14 408 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms