RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 NDOR1Q9UHB4 597 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 KCND3Q9UK17 655 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 ADAM29Q9UKF5 820 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 NPIPB8E9PQR5 432 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 SLCO1B7G3V0H7 640 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 SLC28A1O00337 649 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 ERI3O43414 337 aaKnown RBP11.56□□□□□ -0.56
DDX55-210ENST00000543016 FOXS1O43638 330 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 GALR3O60755 368 aaPredicted RBP11.56□□□□□ -0.56
DDX55-210ENST00000543016 KLHL18O94889 574 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 SCELO95171 688 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 TBX6O95947 436 aaPredicted RBP11.56□□□□□ -0.56
DDX55-210ENST00000543016 RECKO95980 971 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 TGFB1P01137 390 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 PDYNP01213 254 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 CHRNGP07510 517 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 RAB40ALP0C0E4 278 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 RPL14P50914 215 aaKnown RBP11.56□□□□□ -0.56
DDX55-210ENST00000543016 NEK2P51955 445 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 RAP1GDS1P52306 607 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 MTTPP55157 894 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 RPS13P62277 151 aaKnown RBP11.56□□□□□ -0.56
DDX55-210ENST00000543016 AP5B1Q2VPB7 878 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 SH2D4BQ5SQS7 431 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 PRAMEF17Q5VTA0 474 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 MED25Q71SY5 747 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 PAGE2Q7Z2X7 111 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 ZFAND4Q86XD8 727 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 CACNA2D3Q8IZS8 1091 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 EFCAB3Q8N7B9 438 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 C7orf57Q8NEG2 295 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 FAM76AQ8TAV0 307 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 CKAP2Q8WWK9 683 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 MR1Q95460 341 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 NKD1Q969G9 470 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 COL26A1Q96A83 441 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 KIAA1143Q96AT1 154 aaPredicted RBP11.56□□□□□ -0.56
DDX55-210ENST00000543016 MAGEB18Q96M61 343 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 F2RL3Q96RI0 385 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 SERINC2Q96SA4 455 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 SLC26A1Q9H2B4 701 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 WDR54Q9H977 334 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 IFT80Q9P2H3 777 aaPredicted RBP11.56□□□□□ -0.56
DDX55-210ENST00000543016 DHCR7Q9UBM7 475 aaKnown RBP11.56□□□□□ -0.56
DDX55-210ENST00000543016 VPS29Q9UBQ0 182 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 GPN3Q9UHW5 284 aaPredicted RBP11.56□□□□□ -0.56
DDX55-210ENST00000543016 NXT1Q9UKK6 140 aaKnown RBP11.56□□□□□ -0.56
DDX55-210ENST00000543016 PADI2Q9Y2J8 665 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 MAP4K5Q9Y4K4 846 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 TIMM22Q9Y584 194 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 CEP295Q9C0D2 2601 aa11.56□□□□□ -0.56
DDX55-210ENST00000543016 DCHS1Q96JQ0 3298 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 ACACAQ13085 2346 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 IGLV3-12A0A075B6K2 115 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 A0A0A6YYC8 382 aaPredicted RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 I3L1I5 382 aaPredicted RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 PCDH17O14917 1159 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 RRP8O43159 456 aaKnown RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 RGS14O43566 566 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 B3GALT2O43825 422 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 RSL1D1O76021 490 aaKnown RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 CAPNS1P04632 268 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 CYC1P08574 325 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 ZNF888P0CJ79 500 aaPredicted RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 FBLP22087 321 aaKnown RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 PRPH2P23942 346 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 HNRNPH1P31943 449 aaKnown RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 STAT5AP42229 794 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 CCR10P46092 362 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 RPS15P62841 145 aaKnown RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 OCA2Q04671 838 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 IMPG1Q17R60 797 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 DEFB134Q4QY38 66 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 SPIN4Q56A73 249 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 SGO1Q5FBB7 561 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 ARHGAP40Q5TG30 622 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 OR4C11Q6IEV9 310 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 ADNP2Q6IQ32 1131 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 UNQ6494/PRO21346Q6UXR6 183 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 OVCH1Q7RTY7 1134 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 TIPARPQ7Z3E1 657 aaKnown RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 ZCCHC7Q8N3Z6 543 aaKnown RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 IL22RA1Q8N6P7 574 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 ZCCHC10Q8TBK6 192 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 KCNE4Q8WWG9 221 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 MMABQ96EY8 250 aaPredicted RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 C7orf26Q96N11 449 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 SORT1Q99523 831 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 MACROD1Q9BQ69 325 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 TGIF2Q9GZN2 237 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 OR51B5Q9H339 312 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 KLHL31Q9H511 634 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 DDX31Q9H8H2 851 aaKnown RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 COPS7BQ9H9Q2 264 aaPredicted RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 MKKSQ9NPJ1 570 aaPredicted RBP11.55□□□□□ -0.56
DDX55-210ENST00000543016 PRDM7Q9NQW5 492 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 C14orf105Q9NVL8 296 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 SIRT5Q9NXA8 310 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 MS4A12Q9NXJ0 267 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 ZNF282Q9UDV7 671 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms