RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 HSD11B1LQ7Z5J1 315 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 DDX53Q86TM3 631 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 NPAS3Q8IXF0 933 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CMTM8Q8IZV2 173 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 DNAJC22Q8N4W6 341 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TRAM1L1Q8N609 369 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 MEIOBQ8N635 442 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PAF1Q8N7H5 531 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ATG16L2Q8NAA4 619 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CHST14Q8NCH0 376 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 RHOXF1Q8NHV9 184 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ATL1Q8WXF7 558 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ELMO1Q92556 727 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 MRPS31Q92665 395 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 RPL3LQ92901 407 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC38A4Q969I6 547 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 UBE2FQ969M7 185 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SH3KBP1Q96B97 665 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TIFAQ96CG3 184 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF689Q96CS4 500 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 VWCEQ96DN2 955 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 WDR34Q96EX3 536 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SCLYQ96I15 445 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF558Q96NG5 402 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 MYOCQ99972 504 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 BBS2Q9BXC9 721 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 EMILIN2Q9BXX0 1053 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ITPAQ9BY32 194 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 BHLHE41Q9C0J9 482 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 NXF2Q9GZY0 626 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 FAM83DQ9H4H8 585 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 EPS8L2Q9H6S3 715 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 RC3H2Q9HBD1 1191 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PCDH12Q9NPG4 1184 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 INIPQ9NRY2 104 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 THSD1Q9NS62 852 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TMEM184CQ9NVA4 438 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ATAD3AQ9NVI7 634 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 GPATCH2Q9NW75 528 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TRNAU1APQ9NX07 287 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ADPRHL2Q9NX46 363 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 NDUFAF4Q9P032 175 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 STOX2Q9P2F5 926 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF282Q9UDV7 671 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 DAPK2Q9UIK4 370 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SH3BP1Q9Y3L3 701 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PCDHGA2Q9Y5H1 932 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 LYVE1Q9Y5Y7 322 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TRAV19A0A0A6YYK7 116 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC5A10A0PJK1 596 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ISPDA4D126 451 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PABPN1LA6NDY0 278 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TMEM247A6NEH6 219 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PRAMEF25A6NGN4 478 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 METTL15A6NJ78 407 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 FADS2P1A8MWK0 482 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 EFCAB9A8MZ26 197 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 UPK3BL1B0FP48 263 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 UPK3BL2E5RIL1 263 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TAF4O00268 1085 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 QSOX1O00391 747 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TEX28O15482 410 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 AQP9O43315 295 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PCDH7O60245 1069 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 KLHL18O94889 574 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 URODP06132 367 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CDK1P06493 297 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CKMP06732 381 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ANXA4P09525 319 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TPP2P29144 1249 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 IMPA1P29218 277 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ALDH4A1P30038 563 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 RRM2P31350 389 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TIA1P31483 386 aaKnown RBP eCLIP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 LIPAP38571 399 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 EIF2DP41214 584 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC19A1P41440 591 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 MAPK9P45984 424 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 LIMS1P48059 325 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 HMGA2P52926 109 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 LSM3P62310 102 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 EEF1A2Q05639 463 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 RBBP4Q09028 425 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ELP6Q0PNE2 266 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 IRF3Q14653 427 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 INAVAQ3KP66 663 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SPIN4Q56A73 249 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PAGE2BQ5JRK9 111 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TOR1AIP1Q5JTV8 583 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PRSS36Q5K4E3 855 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CATSPEREQ5SY80 951 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 C10orf62Q5T681 223 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 HENMT1Q5T8I9 393 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TMEM236Q5W0B7 351 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TUBA3EQ6PEY2 450 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 BRAT1Q6PJG6 821 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CCDC81Q6ZN84 652 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SLCO4C1Q6ZQN7 724 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PLEKHG7Q6ZR37 379 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 AHSA2Q719I0 299 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms