RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 TOR1AIP1Q5JTV8 583 aa18.62■□□□□ 0.57
DDX11-220ENST00000542244 PRAMEF9Q5VWM5 478 aa18.62■□□□□ 0.57
DDX11-220ENST00000542244 STRA8Q7Z7C7 330 aa18.62■□□□□ 0.57
DDX11-220ENST00000542244 SLC34A3Q8N130 599 aa18.62■□□□□ 0.57
DDX11-220ENST00000542244 CA13Q8N1Q1 262 aa18.62■□□□□ 0.57
DDX11-220ENST00000542244 SPATA6LQ8N4H0 392 aa18.62■□□□□ 0.57
DDX11-220ENST00000542244 TMEM52Q8NDY8 209 aa18.62■□□□□ 0.57
DDX11-220ENST00000542244 GPR137Q96N19 417 aa18.62■□□□□ 0.57
DDX11-220ENST00000542244 NAT9Q9BTE0 207 aa18.62■□□□□ 0.57
DDX11-220ENST00000542244 ZNF835Q9Y2P0 537 aa18.62■□□□□ 0.57
DDX11-220ENST00000542244 CLDN16Q9Y5I7 305 aa18.62■□□□□ 0.57
DDX11-220ENST00000542244 APCP25054 2843 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 FAM95CA0A1B0GW59 222 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 TBX6O95947 436 aaPredicted RBP18.61■□□□□ 0.57
DDX11-220ENST00000542244 ART3Q13508 389 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 RUNX2Q13950 521 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 MORF4L2Q15014 288 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 TSNQ15631 228 aaKnown RBP18.61■□□□□ 0.57
DDX11-220ENST00000542244 RPS19BP1Q86WX3 136 aaKnown RBP18.61■□□□□ 0.57
DDX11-220ENST00000542244 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.61■□□□□ 0.57
DDX11-220ENST00000542244 PDIK1LQ8N165 341 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 FBXO36Q8NEA4 188 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 MCMBPQ9BTE3 642 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 TRIM54Q9BYV2 358 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 FAM129AQ9BZQ8 928 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 PELI2Q9HAT8 420 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 ZFATQ9P243 1243 aa18.61■□□□□ 0.57
DDX11-220ENST00000542244 ZNF223Q9UK11 482 aaPredicted RBP18.61■□□□□ 0.57
DDX11-220ENST00000542244 PRMT3O60678 531 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 SEC31AO94979 1220 aaKnown RBP18.6■□□□□ 0.57
DDX11-220ENST00000542244 ENO2P09104 434 aaPredicted RBP18.6■□□□□ 0.57
DDX11-220ENST00000542244 IL10P22301 178 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 HTR1EP28566 365 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 EEF1DP29692 281 aaKnown RBP18.6■□□□□ 0.57
DDX11-220ENST00000542244 HNRNPH1P31943 449 aaKnown RBP18.6■□□□□ 0.57
DDX11-220ENST00000542244 AHRP35869 848 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 DR1Q01658 176 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 ALDH6A1Q02252 535 aaKnown RBP18.6■□□□□ 0.57
DDX11-220ENST00000542244 RGS1Q08116 209 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 MGAT5Q09328 741 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 PDIA2Q13087 525 aaKnown RBP18.6■□□□□ 0.57
DDX11-220ENST00000542244 SLC25A25Q6KCM7 469 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 C3P1Q6ZMU1 363 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 C16orf47Q6ZP98 133 aaPredicted RBP18.6■□□□□ 0.57
DDX11-220ENST00000542244 CAPN12Q6ZSI9 719 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 VN1R5Q7Z5H4 357 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 CPSF7Q8N684 471 aaKnown RBP18.6■□□□□ 0.57
DDX11-220ENST00000542244 SLC5A8Q8N695 610 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 THAP3Q8WTV1 239 aaPredicted RBP18.6■□□□□ 0.57
DDX11-220ENST00000542244 SREK1Q8WXA9 508 aaKnown RBP18.6■□□□□ 0.57
DDX11-220ENST00000542244 ATL1Q8WXF7 558 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 CAB39LQ9H9S4 337 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 MOCS1Q9NZB8 636 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 LRFN1Q9P244 771 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 DYRK1BQ9Y463 629 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 PCDHGB6Q9Y5F9 930 aa18.6■□□□□ 0.57
DDX11-220ENST00000542244 PDZD2O15018 2839 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 MYOCOSA0A1B0GUC4 107 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 TCRBV16S1A1N1A0A5B0 115 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 SAGE2PA6NJ88 616 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 CXorf49A8MYA2 514 aaPredicted RBP18.59■□□□□ 0.57
DDX11-220ENST00000542244 TAPBPO15533 448 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 WISP3O95389 354 aaPredicted RBP18.59■□□□□ 0.57
DDX11-220ENST00000542244 RFC3P40938 356 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 RPL21P46778 160 aaKnown RBP18.59■□□□□ 0.57
DDX11-220ENST00000542244 MLF1P58340 268 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 BTN3A2P78410 334 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 MAPKAPK3Q16644 382 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 SLCO4C1Q6ZQN7 724 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 QSOX2Q6ZRP7 698 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 ESAMQ96AP7 390 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 CORO1CQ9ULV4 474 aaPredicted RBP18.59■□□□□ 0.57
DDX11-220ENST00000542244 MTO1Q9Y2Z2 717 aaKnown RBP18.59■□□□□ 0.57
DDX11-220ENST00000542244 SNX24Q9Y343 169 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 OARD1Q9Y530 152 aa18.59■□□□□ 0.57
DDX11-220ENST00000542244 NCF1BA6NI72 391 aaPredicted RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 NCF1CA8MVU1 366 aaPredicted RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 ZSCAN12O43309 604 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 PRKNO60260 465 aaPredicted RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 NCF1P14598 390 aaPredicted RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 CD46P15529 392 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 TCP1P17987 556 aaKnown RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 JAK1P23458 1154 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 SLC6A12P48065 614 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 FRG1Q14331 258 aaKnown RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 ZNF630Q2M218 657 aaPredicted RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 BNC2Q6ZN30 1099 aaPredicted RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 Q6ZPB1 254 aaPredicted RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 ABHD13Q7L211 337 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 SPPL2CQ8IUH8 684 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 ZNF808Q8N4W9 903 aaPredicted RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 APCDD1LQ8NCL9 501 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 RHBDF1Q96CC6 855 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 PHF12Q96QT6 1004 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 EGFL8Q99944 293 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 AIF1LQ9BQI0 150 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 TMEM79Q9BSE2 394 aa18.58■□□□□ 0.56
DDX11-220ENST00000542244 LIN28AQ9H9Z2 209 aaKnown RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 SUCOQ9UBS9 1254 aaKnown RBP18.58■□□□□ 0.56
DDX11-220ENST00000542244 E7ESA3 106 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms