RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 KIR2DS5Q14953 304 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 CA9Q16790 459 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 C9orf57Q5W0N0 161 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 KCTD11Q693B1 232 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 OR4A47Q6IF82 309 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 TTC27Q6P3X3 843 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 CORO6Q6QEF8 472 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 RBM43Q6ZSC3 357 aaKnown RBP3.9□□□□□ -1.79
SNHG1-217ENST00000541578 ASB18Q6ZVZ8 466 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 PRSS42Q7Z5A4 293 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 ZNF554Q86TJ5 538 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 MMD2Q8IY49 270 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 THEM5Q8N1Q8 247 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 MUC20Q8N307 709 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-217ENST00000541578 MRPL43Q8N983 215 aaKnown RBP3.9□□□□□ -1.79
SNHG1-217ENST00000541578 ANP32BQ92688 251 aaKnown RBP3.9□□□□□ -1.79
SNHG1-217ENST00000541578 P2RX5Q93086 422 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 SCMH1Q96GD3 660 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 ZNF385AQ96PM9 386 aaKnown RBP3.9□□□□□ -1.79
SNHG1-217ENST00000541578 C1QTNF4Q9BXJ3 329 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 NYXQ9GZU5 481 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 RIMS4Q9H426 269 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-217ENST00000541578 CHST11Q9NPF2 352 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 ECHDC1Q9NTX5 307 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 NINJ2Q9NZG7 142 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 MALT1Q9UDY8 824 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 TSPAN16Q9UKR8 245 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 BLOC1S6Q9UL45 172 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 SLC7A7Q9UM01 511 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 MAP3K19Q56UN5 1328 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 TRPM7Q96QT4 1865 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 AKAP11Q9UKA4 1901 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 MAP2P11137 1827 aaKnown RBP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 PLSCR5A0PG75 271 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 C5orf51A6NDU8 294 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 HNRNPCL2B2RXH8 293 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 ERVV-2B6SEH9 535 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 PRSS46E5RG02 174 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 E9PI62 339 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 NME6O75414 186 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 BAG3O95817 575 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 LINC00271P0C7V0 271 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 ETS1P14921 441 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 ITGA2P17301 1181 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 GM2AP17900 193 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 CCNA2P20248 432 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 CDH3P22223 829 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 MARCKSP29966 332 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 PRPHP41219 470 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 RABIFP47224 123 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 ARCN1P48444 511 aaKnown RBP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 CDH11P55287 796 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 ERVFC1-1P60608 527 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 RELQ04864 619 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 SLC20A2Q08357 652 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 STXBP2Q15833 593 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 CARTPTQ16568 116 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 UGT3A2Q3SY77 523 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 C9orf50Q5SZB4 431 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 CYP4A22Q5TCH4 519 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 LYSMD4Q5XG99 296 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 BTNL8Q6UX41 500 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 LINGO4Q6UY18 593 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 CUZD1Q86UP6 607 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 TMEM139Q8IV31 216 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 DNAJC22Q8N4W6 341 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 CLEC1AQ8NC01 280 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 OR11H4Q8NGC9 324 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 ULK4Q96C45 1275 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 SPATA13Q96N96 652 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 TSSK2Q96PF2 358 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 KCNK16Q96T55 309 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 P2RY12Q9H244 342 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 IL25Q9H293 177 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 CHMP4BQ9H444 224 aaKnown RBP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 DDX31Q9H8H2 851 aaKnown RBP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 RPF1Q9H9Y2 349 aaKnown RBP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 APOBEC3GQ9HC16 384 aaKnown RBP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 GPN1Q9HCN4 374 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 POLE3Q9NRF9 147 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 TMEM30AQ9NV96 361 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 LRWD1Q9UFC0 647 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 UBQLN2Q9UHD9 624 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 TRMT6Q9UJA5 497 aaKnown RBP3.89□□□□□ -1.79
SNHG1-217ENST00000541578 ICAM5Q9UMF0 924 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 KCNJ14Q9UNX9 436 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 KIF3AQ9Y496 699 aa3.89□□□□□ -1.79
SNHG1-217ENST00000541578 CD163L1Q9NR16 1453 aa3.88□□□□□ -1.79
SNHG1-217ENST00000541578 C4AP0C0L4 1744 aa3.88□□□□□ -1.79
SNHG1-217ENST00000541578 TRAV18A0A075B6X5 111 aa3.88□□□□□ -1.79
SNHG1-217ENST00000541578 A0A1W2PPK0 400 aa3.88□□□□□ -1.79
SNHG1-217ENST00000541578 CFAP73A6NFT4 308 aa3.88□□□□□ -1.79
SNHG1-217ENST00000541578 NPIPA3F8WFD2 350 aa3.88□□□□□ -1.79
SNHG1-217ENST00000541578 MAGEB2O15479 319 aa3.88□□□□□ -1.79
SNHG1-217ENST00000541578 LDB3O75112 727 aa3.88□□□□□ -1.79
SNHG1-217ENST00000541578 GRAP2O75791 330 aa3.88□□□□□ -1.79
SNHG1-217ENST00000541578 LETM1O95202 739 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-217ENST00000541578 TRIM16O95361 564 aa3.88□□□□□ -1.79
SNHG1-217ENST00000541578 PMS2P2O95744 297 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms