RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SERPINA1P01009 418 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 KLKB1P03952 638 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 APODP05090 189 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 CAPN1P07384 714 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 SRPRAP08240 638 aaKnown RBP10.02□□□□□ -0.81
CHFR-219ENST00000541341 ATXN1LP0C7T5 689 aaKnown RBP10.02□□□□□ -0.81
CHFR-219ENST00000541341 G6PDP11413 515 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 ADH5P11766 374 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 ZNF7P17097 686 aaPredicted RBP10.02□□□□□ -0.81
CHFR-219ENST00000541341 ITPKAP23677 461 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 PTBP1P26599 531 aaKnown RBP eCLIP10.02□□□□□ -0.81
CHFR-219ENST00000541341 HLA-FP30511 346 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 NUDT1P36639 197 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 CHRNA4P43681 627 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 FOXA1P55317 472 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 ITGA1P56199 1179 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 OR2B6P58173 313 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 MTPNP58546 118 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 VBP1P61758 197 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 SCN1BQ07699 218 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 PCDH1Q08174 1060 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 NPRL3Q12980 569 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 RAPSNQ13702 412 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 KIAA0040Q15053 153 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 CDK10Q15131 360 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 TSNQ15631 228 aaKnown RBP10.02□□□□□ -0.81
CHFR-219ENST00000541341 TIGD6Q17RP2 521 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 C5orf22Q49AR2 442 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 LY6G5CQ5SRR4 150 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 ARTNQ5T4W7 220 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 CCBE1Q6UXH8 406 aaPredicted RBP10.02□□□□□ -0.81
CHFR-219ENST00000541341 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.02□□□□□ -0.81
CHFR-219ENST00000541341 CCDC81Q6ZN84 652 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 Q6ZSR9 355 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 EIF3MQ7L2H7 374 aaKnown RBP10.02□□□□□ -0.81
CHFR-219ENST00000541341 B3GNT8Q7Z7M8 397 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 ZNF605Q86T29 641 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 ZSWIM9Q86XI8 627 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 SLC44A2Q8IWA5 706 aaPredicted RBP10.02□□□□□ -0.81
CHFR-219ENST00000541341 ADGRG2Q8IZP9 1017 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 CPXM2Q8N436 756 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 CDYL2Q8N8U2 506 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 ATG16L2Q8NAA4 619 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 NDNFQ8TB73 568 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 ARRDC2Q8TBH0 407 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 ULK4Q96C45 1275 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 MYO19Q96H55 970 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 SLC30A2Q9BRI3 323 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 SLC6A17Q9H1V8 727 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 RIBC2Q9H4K1 309 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 MARCH7Q9H992 704 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 LRTM1Q9HBL6 345 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 CD93Q9NPY3 652 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 AASDHPPTQ9NRN7 309 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 STMN3Q9NZ72 180 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 EHD3Q9NZN3 535 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 OPTCQ9UBM4 332 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 TMEFF2Q9UIK5 374 aaPredicted RBP10.02□□□□□ -0.81
CHFR-219ENST00000541341 LSM7Q9UK45 103 aaKnown RBP10.02□□□□□ -0.81
CHFR-219ENST00000541341 DHRS7Q9Y394 339 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 TIMM22Q9Y584 194 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 PCDHB14Q9Y5E9 798 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 PCDHGB6Q9Y5F9 930 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 HS3ST4Q9Y661 456 aa10.02□□□□□ -0.81
CHFR-219ENST00000541341 IRGMA1A4Y4 181 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 B4GAT1O43505 415 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 NOBOXO60393 691 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 ACSL4O60488 711 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 MT-ND2P03891 347 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 CDK1P06493 297 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 EPB42P16452 691 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 ENGP17813 658 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 DDX5P17844 614 aaKnown RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 ALOX12P18054 663 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 TSPAN8P19075 237 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 PRPS1L1P21108 318 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 ERP29P30040 261 aaKnown RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 CORO1AP31146 461 aaKnown RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 RRM2P31350 389 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 FMO4P31512 558 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 P2RY2P41231 377 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 ZNF140P52738 457 aaPredicted RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 MLLT10P55197 1068 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 CACNG1Q06432 222 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 C19orf57Q0VDD7 668 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 COL9A2Q14055 689 aaPredicted RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 TAB1Q15750 504 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 PTPRNQ16849 979 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 GGTA1PQ4G0N0 100 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 LDLRAP1Q5SW96 308 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 ARMC4Q5T2S8 1044 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 C10orf62Q5T681 223 aaPredicted RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 PIK3R6Q5UE93 754 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 STEAP3Q658P3 488 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 FAHD1Q6P587 224 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 DET1Q7L5Y6 550 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 SLC46A3Q7Z3Q1 461 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 GLT6D1Q7Z4J2 308 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 C14orf80Q86SX3 495 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 RNF130Q86XS8 419 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms