RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 HNRNPFP52597 415 aaKnown RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 ZFP36L1Q07352 338 aaKnown RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 ABRQ12979 859 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 FZD2Q14332 565 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 C16orf72Q14CZ0 275 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 CYP2A13Q16696 494 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 AP5B1Q2VPB7 878 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 PTCHD3Q3KNS1 767 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 FRG2Q64ET8 278 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 LETMD1Q6P1Q0 360 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 PGM2L1Q6PCE3 622 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 BLOC1S3Q6QNY0 202 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 RFLNAQ6ZTI6 216 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 THOC6Q86W42 341 aaKnown RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 TRIM69Q86WT6 500 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 MYLK4Q86YV6 388 aaPredicted RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 TMEM126BQ8IUX1 230 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 TBC1D21Q8IYX1 336 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 KRT78Q8N1N4 520 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 CATSPER1Q8NEC5 780 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 OR56A3Q8NH54 315 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 LMX1AQ8TE12 382 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 SELENOMQ8WWX9 145 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 CCDC74AQ96AQ1 378 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 CMTM7Q96FZ5 175 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 PPP1R36Q96LQ0 422 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 NSUN5Q96P11 429 aaKnown RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 FRG2BQ96QU4 278 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 CENPKQ9BS16 269 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 TRIM8Q9BZR9 551 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 TRIT1Q9H3H1 467 aaKnown RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 TCEAL2Q9H3H9 227 aaPredicted RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 DENND2DQ9H6A0 471 aaPredicted RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 MVB12BQ9H7P6 319 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 RMND5AQ9H871 391 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 LRTM1Q9HBL6 345 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 CCDC177Q9NQR7 707 aaPredicted RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 AHSPQ9NZD4 102 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 CCDC167Q9P0B6 97 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 STX18Q9P2W9 335 aaKnown RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 ATXN10Q9UBB4 475 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 KLQ9UEF7 1012 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 IKZF3Q9UKT9 509 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 ZNF490Q9ULM2 529 aaPredicted RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 DMTF1Q9Y222 760 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 ITM2BQ9Y287 266 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 L3MBTL1Q9Y468 752 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 GPR45Q9Y5Y3 372 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 COLEC10Q9Y6Z7 277 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 A0A088AWK7 358 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 LOC101059948A0A1B0GTJ6 334 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 ATP6AP2A0A1C7CYW4 349 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 A0A1W2PQU0 124 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 ARHGEF33A8MVX0 844 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 FOXE1O00358 373 aaPredicted RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 SPINT1O43278 529 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 AQP9O43315 295 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 SEC22BO75396 215 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 ATP6AP2O75787 350 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 DNAJB5O75953 348 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 CCNDBP1O95273 360 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 PSMG1O95456 288 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 C1orf105O95561 183 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 FURINP09958 794 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 SLC2A4P14672 509 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 ZNF8P17098 575 aaPredicted RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 GM2AP17900 193 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 PRPS1L1P21108 318 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 PIK3CBP42338 1070 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 GSTM5P46439 218 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 CLCNKAP51800 687 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 POLR2JP52435 117 aaKnown RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 CTSCP53634 463 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 KIAA1024LP59773 190 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 PSME3P61289 254 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 HNRNPKP61978 463 aaKnown RBP eCLIP8.01□□□□□ -1.13
CHD4-208ENST00000540960 SLC25A3Q00325 362 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 SLC34A1Q06495 639 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 C1orf61Q13536 156 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 RCAN2Q14206 197 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 KRT33BQ14525 404 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 WSCD2Q2TBF2 565 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 TMEM259Q4ZIN3 620 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 SPIN4Q56A73 249 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 XKR6Q5GH73 641 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 TPRG1LQ5T0D9 272 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 METRNLQ641Q3 311 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 TMEM198Q66K66 360 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 GRHL2Q6ISB3 625 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 MED27Q6P2C8 311 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 CDH24Q86UP0 819 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 DCP2Q8IU60 420 aaKnown RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 SYTL1Q8IYJ3 562 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 DPP10Q8N608 796 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 NATD1Q8N6N6 113 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 POU5F2Q8N7G0 328 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 Q8NA96 180 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 AVL9Q8NBF6 648 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 VPS37AQ8NEZ2 397 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 TTLQ8NG68 377 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms