RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 ABCE1P61221 599 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 MC1RQ01726 317 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 DSG2Q14126 1118 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 HKDC1Q2TB90 917 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 COL28A1Q2UY09 1125 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 AP5B1Q2VPB7 878 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 NKAIN1Q4KMZ8 207 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 ARL13AQ5H913 290 aaPredicted RBP16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 BROXQ5VW32 411 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 PRAMEF9Q5VWM5 478 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 KHDRBS2Q5VWX1 349 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 LETMD1Q6P1Q0 360 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 SYVN1Q86TM6 617 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 CUZD1Q86UP6 607 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 CDYL2Q8N8U2 506 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 GALNT6Q8NCL4 622 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 MR1Q95460 341 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 CDK15Q96Q40 435 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 SLC26A1Q9H2B4 701 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 MANSC1Q9H8J5 431 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 WDR54Q9H977 334 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 DMRT3Q9NQL9 472 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 C14orf105Q9NVL8 296 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 MAP4K5Q9Y4K4 846 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 SPACA6W5XKT8 324 aa16.65■□□□□ 0.26
CLSTN3-210ENST00000540931 NRP2O60462 931 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 TIAF1O95411 115 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 STAT5AP42229 794 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 SLC1A6P48664 564 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 WDR4P57081 412 aaKnown RBP16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 OCA2Q04671 838 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 TOR1AIP1Q5JTV8 583 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 ARHGEF39Q8N4T4 335 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 NKD1Q969G9 470 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 COL26A1Q96A83 441 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 MS4A6EQ96DS6 147 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 C10orf90Q96M02 699 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 SERINC2Q96SA4 455 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 MKKSQ9NPJ1 570 aaPredicted RBP16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 MS4A12Q9NXJ0 267 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 IFT80Q9P2H3 777 aaPredicted RBP16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 ZNF282Q9UDV7 671 aaPredicted RBP16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 ADAM29Q9UKF5 820 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 RAP2CQ9Y3L5 183 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 PCDHGA6Q9Y5G7 932 aa16.64■□□□□ 0.25
CLSTN3-210ENST00000540931 WDR91A4D1P6 747 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 SLC28A1O00337 649 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 MANBAO00462 879 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 P2RX6O15547 441 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 ERI3O43414 337 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 B3GALT2O43825 422 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 GALR3O60755 368 aaPredicted RBP16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 GUCY1B2O75343 617 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 SMIM10L1P0DMW3 83 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 FBLP22087 321 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 GSTM5P46439 218 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 MTTPP55157 894 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 CYP4F2P78329 520 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 DDX39BQ13838 428 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 ZNF385CQ66K41 422 aaPredicted RBP16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 ZFAND4Q86XD8 727 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 ZSCAN1Q8NBB4 408 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 KCT2Q8NC54 265 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 MGARPQ8TDB4 240 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 LRRC8CQ8TDW0 803 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 UTP15Q8TED0 518 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 MMABQ96EY8 250 aaPredicted RBP16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 SMIM10Q96HG1 83 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 OR1F2PQ96R84 312 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 MTERF1Q99551 399 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 STARD5Q9NSY2 213 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 DHCR7Q9UBM7 475 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 VPS29Q9UBQ0 182 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 ZNF225Q9UK10 706 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 MRPS33Q9Y291 106 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 TRAF6Q9Y4K3 522 aa16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 URB1O60287 2271 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-210ENST00000540931 PMS2P1A4D2B8 440 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 MAGEB17A8MXT2 336 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 FFAR3O14843 346 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 GPR42O15529 346 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 RGS14O43566 566 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 IGHEP01854 428 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 CHN1P15882 459 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 ZNF28P17035 718 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 TSPAN8P19075 237 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 TCN2P20062 427 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 JAK1P23458 1154 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 RPL14P50914 215 aaKnown RBP16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 HYAL2Q12891 473 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 IMPG1Q17R60 797 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 CRTC2Q53ET0 693 aaPredicted RBP16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 SPIN4Q56A73 249 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 ARHGAP40Q5TG30 622 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 ABHD17CQ6PCB6 329 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 MED25Q71SY5 747 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 RPS27LQ71UM5 84 aaKnown RBP16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 OVCH1Q7RTY7 1134 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 TRIM46Q7Z4K8 759 aa16.62■□□□□ 0.25
CLSTN3-210ENST00000540931 PARP9Q8IXQ6 854 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms