RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 LPAL2Q16609 132 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 MAPKAPK3Q16644 382 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 TIGD6Q17RP2 521 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ZMAT1Q5H9K5 638 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 LHX8Q68G74 356 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 PAQR3Q6TCH7 311 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 VITQ6UXI7 678 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ZNF517Q6ZMY9 492 aaPredicted RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 Q6ZSR9 355 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 NRARPQ7Z6K4 114 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CYP4Z1Q86W10 505 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 LINC00469Q8N7U9 141 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 TOR1AIP2Q8NFQ8 470 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 POF1BQ8WVV4 589 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 FAM120BQ96EK7 910 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 IMP4Q96G21 291 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 PDLIM5Q96HC4 596 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 CDADC1Q9BWV3 514 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 C1QTNF3Q9BXJ4 246 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 UCK2Q9BZX2 261 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 MS4A7Q9GZW8 240 aaPredicted RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 ACTL8Q9H568 366 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CSNK1G1Q9HCP0 422 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ATP13A2Q9NQ11 1180 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 RASSF1Q9NS23 344 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 VNN3Q9NY84 501 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 EIF2B4Q9UI10 523 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 OR10H1Q9Y4A9 318 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 LYVE1Q9Y5Y7 322 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ACACAQ13085 2346 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CHD5Q8TDI0 1954 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 LOC100506127A0A0U1RQW1 187 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 LCHNA4D1U4 455 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 SYN3O14994 580 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CAPN5O15484 640 aaPredicted RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 RPP40O75818 363 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 LRATO95237 230 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 PRLP01236 227 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CSF2P04141 144 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 HOXC13P31276 330 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 SOX6P35712 828 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 SLC15A1P46059 708 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 HTR6P50406 440 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 DAPP51397 102 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 DSC2Q02487 901 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ELP6Q0PNE2 266 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 GBX1Q14549 363 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CPZQ66K79 652 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 SYCE2Q6PIF2 218 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 POMZP3Q6PJE2 187 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 GCNT7Q6ZNI0 430 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 AMIGO1Q86WK6 493 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 RAB43Q86YS6 212 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CMTM8Q8IZV2 173 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 BADQ92934 168 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 RIT1Q92963 219 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ESAMQ96AP7 390 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 AP2M1Q96CW1 435 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 TMCO6Q96DC7 493 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 TOE1Q96GM8 510 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 PYURFQ96I23 114 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 RIPOR3Q96MK2 946 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ZNF382Q96SR6 550 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CCDC32Q9BV29 185 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 HDHD5Q9BXW7 423 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 MKRN2Q9H000 416 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 WASH6PQ9NQA3 447 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.05□□□□□ -1.6
PROM1-220ENST00000540805 ABCB8Q9NUT2 735 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 TAS2R9Q9NYW1 312 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 AHSPQ9NZD4 102 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 GALPQ9UBC7 116 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ATP6V1HQ9UI12 483 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 IKZF3Q9UKT9 509 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 DOCK4Q8N1I0 1966 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 OR10H2O60403 315 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 EFEMP2O95967 443 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 VIPP01282 170 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 PSKH1P11801 424 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 IL1RNP18510 177 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 DDCP20711 480 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 LPOP22079 712 aaPredicted RBP5.04□□□□□ -1.6
PROM1-220ENST00000540805 ITPKAP23677 461 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 TGM4P49221 684 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 PRMT2P55345 433 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 SRSF11Q05519 484 aaKnown RBP5.04□□□□□ -1.6
PROM1-220ENST00000540805 GPR68Q15743 365 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 TBCEQ15813 527 aaPredicted RBP5.04□□□□□ -1.6
PROM1-220ENST00000540805 PROX2Q3B8N5 592 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 SIRPB2Q5JXA9 342 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 KIAA1614Q5VZ46 1190 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 KDM4DQ6B0I6 523 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 FAM171BQ6P995 826 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 SLC46A3Q7Z3Q1 461 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 KCTD20Q7Z5Y7 419 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 TSPYL5Q86VY4 417 aaPredicted RBP5.04□□□□□ -1.6
PROM1-220ENST00000540805 BBS7Q8IWZ6 715 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 OR8H2Q8N162 312 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 NKAPQ8N5F7 415 aaKnown RBP5.04□□□□□ -1.6
PROM1-220ENST00000540805 GPR150Q8NGU9 434 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms