RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CCDC71Q8IV32 467 aaPredicted RBP6.82□□□□□ -1.32
YBX3-209ENST00000540747 MMP21Q8N119 569 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 SLC13A3Q8WWT9 602 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 AICDAQ9GZX7 198 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 PCBD2Q9H0N5 130 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 ZDHHC11Q9H8X9 412 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 DEPPQ9NTK1 212 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 ZNF358Q9NW07 568 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.82□□□□□ -1.32
YBX3-209ENST00000540747 ADAMTS6Q9UKP5 1117 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 PDE10AQ9Y233 779 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 VPS9D1Q9Y2B5 631 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 RPH3AQ9Y2J0 694 aaPredicted RBP6.82□□□□□ -1.32
YBX3-209ENST00000540747 L3MBTL1Q9Y468 752 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 V9GYY5 206 aaPredicted RBP6.82□□□□□ -1.32
YBX3-209ENST00000540747 CSPG4Q6UVK1 2322 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 FAM237BA0A1B0GVD1 139 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 PINLYPA6NC86 204 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 TMEM200CA6NKL6 621 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 C4orf51C9J302 202 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 E5RI56 91 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 PFDN6O15212 129 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 ZBTB14O43829 449 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 CTAG2O75638 210 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 FAM155BO75949 473 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 GLSO94925 669 aaPredicted RBP6.81□□□□□ -1.32
YBX3-209ENST00000540747 B3GALT4O96024 378 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 IGHG3P01860 377 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 SLC35G6P0C7Q6 338 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 SMIM10L1P0DMW3 83 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 CDH1P12830 882 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 NPPBP16860 134 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 ALOX12P18054 663 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 KLK2P20151 261 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 JAK1P23458 1154 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 BTG2P78543 158 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 MEF2AQ02078 507 aaPredicted RBP6.81□□□□□ -1.32
YBX3-209ENST00000540747 FOLH1Q04609 750 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 HYAL2Q12891 473 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 SNX1Q13596 522 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 PWP1Q13610 501 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 TERF2Q15554 542 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 CCNG2Q16589 344 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 ERCC6LQ2NKX8 1250 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 DEFB134Q4QY38 66 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 THEMIS2Q5TEJ8 643 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 MEI1Q5TIA1 1274 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 ZNF470Q6ECI4 717 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 RTL6Q6ICC9 239 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 ARHGAP11AQ6P4F7 1023 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 AGTRAPQ6RW13 159 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 LCTLQ6UWM7 567 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 C4orf22Q6V702 233 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 UBE2R2Q712K3 238 aaPredicted RBP6.81□□□□□ -1.32
YBX3-209ENST00000540747 CAND1Q86VP6 1230 aaKnown RBP6.81□□□□□ -1.32
YBX3-209ENST00000540747 C17orf64Q86WR6 236 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 DENND6AQ8IWF6 608 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 SCUBE1Q8IWY4 988 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 CPNE9Q8IYJ1 553 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 AGGF1Q8N302 714 aaeCLIP6.81□□□□□ -1.32
YBX3-209ENST00000540747 OTUD6BQ8N6M0 293 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 CCDC89Q8N998 374 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 OR52N2Q8NGI0 321 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 NT5CQ8TCD5 201 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 RND1Q92730 232 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 TMEM125Q96AQ2 219 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 SMIM10Q96HG1 83 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 OR4K3Q96R72 315 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 GPR21Q99679 349 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 ZNF559Q9BR84 538 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 SLC6A16Q9GZN6 736 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 SPNS1Q9H2V7 528 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 CLK4Q9HAZ1 481 aaKnown RBP6.81□□□□□ -1.32
YBX3-209ENST00000540747 KCNJ16Q9NPI9 418 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 NECTIN3Q9NQS3 549 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 ABCF3Q9NUQ8 709 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 FAM215AQ9Y5M1 114 aa6.81□□□□□ -1.32
YBX3-209ENST00000540747 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 A0A0G2JMM0 328 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 A0A1B0GVC2 190 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 A0A1W2PPB8 328 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 A0A1W2PRS3 328 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 TRBC2A0A5B9 178 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 EFCAB8A8MWE9 144 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 KIR3DP1A8MWS1 328 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 KLRC4-KLRK1H3BQV0 150 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 TGFBR3LH3BV60 316 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 FCHO1O14526 889 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 NDUFS4O43181 175 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 PRKNO60260 465 aaPredicted RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 CEP104O60308 925 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 PRMT3O60678 531 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 B4GALT2O60909 372 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 AVILO75366 819 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 IPO7O95373 1038 aaKnown RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 NADKO95544 446 aaPredicted RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 SYF2O95926 243 aaKnown RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 FOSL1P15407 271 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 MAOAP21397 527 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 CCND1P24385 295 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms