RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 SCN2AQ99250 2005 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 DOCK9Q9BZ29 2069 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 SYNDIG1LA6NDD5 238 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 ANKDD1BA6NHY2 528 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 H3BN98 237 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 NUAK1O60285 661 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 PRKRAO75569 313 aaKnown RBP13.55□□□□□ -0.24
INO80E-203ENST00000540562 CXCL14O95715 111 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 GPX2P18283 190 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 IDSP22304 550 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 PSMB5P28074 263 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 SOX3P41225 446 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 RNF144AP50876 292 aaPredicted RBP13.55□□□□□ -0.24
INO80E-203ENST00000540562 PRKAG1P54619 331 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 SCARB2Q14108 478 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 DUSP7Q16829 419 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 RFX4Q33E94 735 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 LYPLAL1Q5VWZ2 237 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 RAET1GQ6H3X3 334 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 SLC39A11Q8N1S5 342 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 L3MBTL4Q8NA19 623 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 C11orf65Q8NCR3 313 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 WDR20Q8TBZ3 569 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 DYNC2LI1Q8TCX1 351 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 C7orf34Q96L11 122 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 MIEF1Q9NQG6 463 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 TM7SF3Q9NS93 570 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 QPCTLQ9NXS2 382 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 RUVBL1Q9Y265 456 aaKnown RBP13.55□□□□□ -0.24
INO80E-203ENST00000540562 PCYT1BQ9Y5K3 369 aaPredicted RBP13.55□□□□□ -0.24
INO80E-203ENST00000540562 THSD7BQ9C0I4 1608 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 PCM1Q15154 2024 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 M0R082 166 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 IMPDH2P12268 514 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 NR4A2P43354 598 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 MAGEA2P43356 314 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 SRSF11Q05519 484 aaKnown RBP13.55□□□□□ -0.24
INO80E-203ENST00000540562 RAB33AQ14088 237 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 NEK10Q6ZWH5 1172 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 ZNF605Q86T29 641 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 MFSD4AQ8N468 514 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 IQCF1Q8N6M8 205 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 AQP11Q8NBQ7 271 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 OR6Q1Q8NGQ2 317 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 GGHQ92820 318 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 FAM129BQ96TA1 746 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 WFDC6Q9BQY6 131 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 PRR14Q9BWN1 585 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 TBCCD1Q9NVR7 557 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 GFYI3L273 518 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 SLC22A1O15245 554 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 NTN1O95631 604 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 CATP04040 527 aaKnown RBP13.54□□□□□ -0.24
INO80E-203ENST00000540562 IL3P08700 152 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 HOXB9P17482 250 aaPredicted RBP13.54□□□□□ -0.24
INO80E-203ENST00000540562 ITGB8P26012 769 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 HOXD10P28358 340 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 GSTM4Q03013 218 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 ILF2Q12905 390 aaKnown RBP13.54□□□□□ -0.24
INO80E-203ENST00000540562 OXA1LQ15070 435 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 ARMCX4Q5H9R4 360 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 TPGS2Q68CL5 300 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 ZNF783Q6ZMS7 281 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 DOK4Q8TEW6 326 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 YIPF6Q96EC8 236 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 VPS35Q96QK1 796 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 SLIRPQ9GZT3 109 aaKnown RBP13.54□□□□□ -0.24
INO80E-203ENST00000540562 ASAH2Q9NR71 780 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 TSC22D4Q9Y3Q8 395 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 KCNE2Q9Y6J6 123 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 CTDSP2O14595 271 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 GRM6O15303 877 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 MMP20O60882 483 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 BCHEP06276 602 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 ITGAMP11215 1152 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 ZNF8P17098 575 aaPredicted RBP13.54□□□□□ -0.24
INO80E-203ENST00000540562 CD40LGP29965 261 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 TGFBR2P37173 567 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 HNMTP50135 292 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 TSTQ16762 297 aaKnown RBP13.54□□□□□ -0.24
INO80E-203ENST00000540562 HIST2H2ACQ16777 129 aaPredicted RBP13.54□□□□□ -0.24
INO80E-203ENST00000540562 BRAT1Q6PJG6 821 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 ZNF675Q8TD23 568 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 PHF10Q8WUB8 498 aaKnown RBP13.54□□□□□ -0.24
INO80E-203ENST00000540562 EXOSC8Q96B26 276 aaKnown RBP13.54□□□□□ -0.24
INO80E-203ENST00000540562 PPCDCQ96CD2 204 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 TRMT2BQ96GJ1 504 aaKnown RBP13.54□□□□□ -0.24
INO80E-203ENST00000540562 ABHD8Q96I13 439 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 DOHHQ9BU89 302 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 ITPAQ9BY32 194 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 ANKRA2Q9H9E1 313 aa13.54□□□□□ -0.24
INO80E-203ENST00000540562 OR2A25A4D2G3 310 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 WASP42768 502 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 MAPK8P45983 427 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 ITGA1P56199 1179 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 MPEG1Q2M385 716 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 DEPDC1Q5TB30 811 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 PAQR6Q6TCH4 344 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.53□□□□□ -0.24
INO80E-203ENST00000540562 TSPYL5Q86VY4 417 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms