RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 RSRP1Q9BUV0 290 aa10.71□□□□□ -0.69
PBX1-212ENST00000540236 TMEM168Q9H0V1 697 aa10.71□□□□□ -0.69
PBX1-212ENST00000540236 C1orf109Q9NX04 203 aa10.71□□□□□ -0.69
PBX1-212ENST00000540236 NYAP2Q9P242 653 aa10.71□□□□□ -0.69
PBX1-212ENST00000540236 CA5BQ9Y2D0 317 aa10.71□□□□□ -0.69
PBX1-212ENST00000540236 RPH3AQ9Y2J0 694 aaPredicted RBP10.71□□□□□ -0.69
PBX1-212ENST00000540236 ESR1P03372 595 aa10.71□□□□□ -0.69
PBX1-212ENST00000540236 CD6P30203 668 aa10.71□□□□□ -0.69
PBX1-212ENST00000540236 FAM74A1Q5RGS3 127 aa10.71□□□□□ -0.69
PBX1-212ENST00000540236 SLITRK4Q8IW52 837 aa10.71□□□□□ -0.69
PBX1-212ENST00000540236 EEF1AKMT1Q8WVE0 214 aa10.71□□□□□ -0.69
PBX1-212ENST00000540236 MYH14Q7Z406 1995 aaKnown RBP10.71□□□□□ -0.7
PBX1-212ENST00000540236 A0A1W2PRQ8 180 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 GADD45GO95257 159 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 CD3GP09693 182 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 NR2F6P10588 404 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 C7P10643 843 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 APEHP13798 732 aaKnown RBP10.71□□□□□ -0.7
PBX1-212ENST00000540236 HTR1EP28566 365 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 GTF2H2Q13888 395 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 PTPRNQ16849 979 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 RNF151Q2KHN1 245 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 SOWAHAQ2M3V2 549 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 SV2CQ496J9 727 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 GTF2H2CQ6P1K8 395 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 LYPD4Q6UWN0 246 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 GLT6D1Q7Z4J2 308 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 PAQR8Q8TEZ7 354 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 ARNTL2Q8WYA1 636 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 IPPKQ9H8X2 491 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 RPS10P5Q9NQ39 176 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 IGSF5Q9NSI5 407 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 MDM4O15151 490 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 CDK14O94921 469 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 GPR50Q13585 617 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 RBM39Q14498 530 aaKnown RBP10.71□□□□□ -0.7
PBX1-212ENST00000540236 FBXO43Q4G163 708 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 SLX4IPQ5VYV7 408 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 RETSATQ6NUM9 610 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 C10orf71Q711Q0 1435 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 MS4A15Q8N5U1 240 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 TCEANCQ8N8B7 351 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 SPATA33Q96N06 139 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 GJD2Q9UKL4 321 aa10.71□□□□□ -0.7
PBX1-212ENST00000540236 B4GALT3O60512 393 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 EEDO75530 441 aaKnown RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 EGFP01133 1207 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 RAF1P04049 648 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 HTR1AP08908 422 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ACSL1P33121 698 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 RPS5P46782 204 aaKnown RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 FLI1Q01543 452 aaPredicted RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 MGAT3Q09327 533 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 C19orf57Q0VDD7 668 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 TOMM20Q15388 145 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 OR4D1Q15615 310 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ZNF534Q76KX8 674 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ASB2Q96Q27 587 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 FIZ1Q96SL8 496 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 LRTM1Q9HBL6 345 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ANKDD1BA6NHY2 528 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 J3KR12 359 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ZNF197O14709 1029 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 EPHA2P29317 976 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 CTNNB1P35222 781 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 RAB2AP61019 212 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 PARP15Q460N3 678 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 TIPARPQ7Z3E1 657 aaKnown RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 HAVCR2Q8TDQ0 301 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 POLMQ9NP87 494 aaPredicted RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 CLEC2DQ9UHP7 191 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 PCDHA9Q9Y5H5 950 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ITPKAP23677 461 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 RNF144AP50876 292 aaPredicted RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 KCNC4Q03721 635 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 LARS2Q15031 903 aaKnown RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 KYAT1Q16773 422 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 PRAMEF18Q5VWM3 479 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 PRAMEF13Q5VWM6 474 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ZNF280BQ86YH2 543 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 PM20D2Q8IYS1 436 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 PCSK9Q8NBP7 692 aaKnown RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 UPF1Q92900 1129 aaKnown RBP eCLIP10.7□□□□□ -0.7
PBX1-212ENST00000540236 ZFP42Q96MM3 310 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 TRMOQ9BU70 441 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 C20orf24Q9BUV8 137 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ZNF225Q9UK10 706 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ZNF175Q9Y473 711 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 CBSLP0DN79 551 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 PDHA2P29803 388 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 CBSP35520 551 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 GMFBP60983 142 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 TNFRSF17Q02223 184 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ITPK1Q13572 414 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 GRK1Q15835 563 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ODF4Q2M2E3 257 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 SAXO2Q658L1 398 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 TMED4Q7Z7H5 227 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 ZNF300Q96RE9 604 aaPredicted RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 ADAT1Q9BUB4 502 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms