RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 MAPK10P53779 464 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 YBEYP58557 167 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 VBP1P61758 197 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 IL10RBQ08334 325 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 RAPSNQ13702 412 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 GBX1Q14549 363 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 STARD3Q14849 445 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 CDK10Q15131 360 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 CDKL4Q5MAI5 379 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 TPRG1LQ5T0D9 272 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 KIAA1614Q5VZ46 1190 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 WSCD1Q658N2 575 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 FAHD1Q6P587 224 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 ERICH5Q6P6B1 374 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 FAM171BQ6P995 826 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 XKRXQ6PP77 449 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 VHLLQ6RSH7 139 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 C19orf48Q6RUI8 117 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 SPESP1Q6UW49 350 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 CCBE1Q6UXH8 406 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 UNQ6494/PRO21346Q6UXR6 183 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 TAS2R42Q7RTR8 314 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 SLC46A3Q7Z3Q1 461 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 DSG4Q86SJ6 1040 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 CCDC190Q86UF4 302 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 TAC4Q86UU9 113 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 HORMAD1Q86X24 394 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 GPSM1Q86YR5 675 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 METTL4Q8N3J2 472 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 C1orf52Q8N6N3 182 aaKnown RBP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 ASCC1Q8N9N2 400 aaKnown RBP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 PSMA8Q8TAA3 256 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 ARRDC2Q8TBH0 407 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 CAPSLQ8WWF8 208 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 SLC13A3Q8WWT9 602 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 SGCDQ92629 289 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 FAM162AQ96A26 154 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 C8orf48Q96LL4 319 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 MDFIQ99750 246 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 GON7Q9BXV9 100 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 CCDC90BQ9GZT6 254 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 ACTL8Q9H568 366 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 IL1RAPQ9NPH3 570 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 GKN1Q9NS71 199 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 CATSPERZQ9NTU4 200 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 TDP1Q9NUW8 608 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 NLE1Q9NVX2 485 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 C2orf42Q9NWW7 574 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 UXTQ9UBK9 157 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 ZNF225Q9UK10 706 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 RPS6KA6Q9UK32 745 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 NUDT5Q9UKK9 219 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 RNF6Q9Y252 685 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 PKP3Q9Y446 797 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 PCDHGB6Q9Y5F9 930 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 N6AMT1Q9Y5N5 214 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 GMPPBQ9Y5P6 360 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 LYVE1Q9Y5Y7 322 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 NUP210Q8TEM1 1887 aaPredicted RBP7.37□□□□□ -1.23
CCDC60-204ENST00000539847 CACNA1EQ15878 2313 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 NOTOA8MTQ0 251 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 PDZK1P1A8MUH7 402 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 ADARB2-AS1A8MUL3 147 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 ALG1L2C9J202 215 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 CLDN5O00501 218 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 TOR1BO14657 336 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 HOXC11O43248 304 aaPredicted RBP7.37□□□□□ -1.23
CCDC60-204ENST00000539847 RGS14O43566 566 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 HCRTO43612 131 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 TRIM3O75382 744 aaPredicted RBP7.37□□□□□ -1.23
CCDC60-204ENST00000539847 VPS26AO75436 327 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 RFPL3O75679 317 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 DLGAP3O95886 979 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 OTCP00480 354 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 GOT2P00505 430 aaKnown RBP7.37□□□□□ -1.23
CCDC60-204ENST00000539847 RPLP0P05388 317 aaKnown RBP7.37□□□□□ -1.23
CCDC60-204ENST00000539847 PFKLP17858 780 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 TSPAN8P19075 237 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 CXCR2P25025 360 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 PSMB9P28065 219 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 ADH6P28332 368 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 SOX6P35712 828 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 CHRNA4P43681 627 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 CLK3P49761 638 aaKnown RBP7.37□□□□□ -1.23
CCDC60-204ENST00000539847 NOVA1P51513 510 aaKnown RBP7.37□□□□□ -1.23
CCDC60-204ENST00000539847 NCS1P62166 190 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 GALNT3Q14435 633 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 TAF12Q16514 161 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 NKG7Q16617 165 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 NFE2Q16621 373 aaPredicted RBP7.37□□□□□ -1.23
CCDC60-204ENST00000539847 MAPKAPK3Q16644 382 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 DUSP7Q16829 419 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 AP5B1Q2VPB7 878 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 SETMARQ53H47 684 aaPredicted RBP7.37□□□□□ -1.23
CCDC60-204ENST00000539847 SIRPB2Q5JXA9 342 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 CATSPEREQ5SY80 951 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 CACHD1Q5VU97 1274 aa7.37□□□□□ -1.23
CCDC60-204ENST00000539847 RSBN1Q5VWQ0 802 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms