RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ITGB1BP2Q9UKP3 347 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 SLC12A4Q9UP95 1085 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 PCDHGA3Q9Y5H0 932 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 B3GALT1Q9Y5Z6 326 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 SLC22A7Q9Y694 548 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 PTPRBP23467 1997 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 SPTBP11277 2137 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 A0A088AWK7 358 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 RGS14O43566 566 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 MGRN1O60291 552 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 SH3BGRLO75368 114 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 SKAP2O75563 359 aaPredicted RBP14.67□□□□□ -0.06
DDB1-216ENST00000539739 VIMP08670 466 aaKnown RBP14.67□□□□□ -0.06
DDB1-216ENST00000539739 ZNF10P21506 573 aaPredicted RBP14.67□□□□□ -0.06
DDB1-216ENST00000539739 TPP2P29144 1249 aaPredicted RBP14.67□□□□□ -0.06
DDB1-216ENST00000539739 RAP1GDS1P52306 607 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 SKP1P63208 163 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 HYAL2Q12891 473 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 RIPK1Q13546 671 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 FAM53BQ14153 422 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 HERC3Q15034 1050 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 ADPRMQ3LIE5 342 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 KHDRBS2Q5VWX1 349 aaKnown RBP14.67□□□□□ -0.06
DDB1-216ENST00000539739 FAM219BQ5XKK7 198 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 TMEM214Q6NUQ4 689 aaKnown RBP14.67□□□□□ -0.06
DDB1-216ENST00000539739 NIPAL1Q6NVV3 410 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 DNAJC14Q6Y2X3 702 aaPredicted RBP14.67□□□□□ -0.06
DDB1-216ENST00000539739 TRIM46Q7Z4K8 759 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 WDR75Q8IWA0 830 aaKnown RBP14.67□□□□□ -0.06
DDB1-216ENST00000539739 ZCCHC10Q8TBK6 192 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 GAL3ST3Q96A11 431 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 MS4A6EQ96DS6 147 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 SLC46A1Q96NT5 459 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 F2RL3Q96RI0 385 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 KLHL31Q9H511 634 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 VPS29Q9UBQ0 182 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 MARCOQ9UEW3 520 aaPredicted RBP14.67□□□□□ -0.06
DDB1-216ENST00000539739 NDOR1Q9UHB4 597 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 ADAMTS20P59510 1910 aa14.67□□□□□ -0.06
DDB1-216ENST00000539739 PMS2P1A4D2B8 440 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 PIP5K1BO14986 540 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 HDAC3O15379 428 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 ERI3O43414 337 aaKnown RBP14.66□□□□□ -0.06
DDB1-216ENST00000539739 EDF1O60869 148 aaKnown RBP14.66□□□□□ -0.06
DDB1-216ENST00000539739 CPNE3O75131 537 aaKnown RBP14.66□□□□□ -0.06
DDB1-216ENST00000539739 SEMA3DO95025 777 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 TBX6O95947 436 aaPredicted RBP14.66□□□□□ -0.06
DDB1-216ENST00000539739 LINC00032P0C843 101 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 ZNF888P0CJ79 500 aaPredicted RBP14.66□□□□□ -0.06
DDB1-216ENST00000539739 ALOX12P18054 663 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 ALAS2P22557 587 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 ARFIP1P53367 373 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 PRAMEF17Q5VTA0 474 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 RHBDD2Q6NTF9 364 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 TTLL10Q6ZVT0 673 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 OR2L5Q8NG80 312 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 UTP15Q8TED0 518 aaKnown RBP14.66□□□□□ -0.06
DDB1-216ENST00000539739 RGMAQ96B86 450 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 CLIP3Q96DZ5 547 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 SCNM1Q9BWG6 230 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 ACPTQ9BZG2 426 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 ULBP3Q9BZM4 244 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 ANKHQ9HCJ1 492 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 KLK13Q9UKR3 277 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 TRPC5OSA6NMA1 111 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 DSCR3O14972 297 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 NVLO15381 856 aaKnown RBP14.66□□□□□ -0.06
DDB1-216ENST00000539739 TIAF1O95411 115 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 NTRK1P04629 796 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 AVPR1BP47901 424 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 PLA2G16P53816 162 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 SH3BGRP55822 239 aaPredicted RBP14.66□□□□□ -0.06
DDB1-216ENST00000539739 RAB8AP61006 207 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 HMGCS1Q01581 520 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 CAMK2BQ13554 666 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 AP5B1Q2VPB7 878 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 SPDYAQ5MJ70 313 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 IGF2-ASQ6U949 168 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 PMEPA1Q969W9 287 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 PPP1R14BQ96C90 147 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 C19orf60Q96EN9 201 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 MVB12AQ96EY5 273 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 C10orf90Q96M02 699 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 KCNC2Q96PR1 638 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 TBCDQ9BTW9 1192 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 ROGDIQ9GZN7 287 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 TUBB1Q9H4B7 451 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 COPS7BQ9H9Q2 264 aaPredicted RBP14.66□□□□□ -0.06
DDB1-216ENST00000539739 RIC8BQ9NVN3 520 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 CDC14AQ9UNH5 594 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 NEUROG3Q9Y4Z2 214 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 AK5Q9Y6K8 562 aa14.66□□□□□ -0.06
DDB1-216ENST00000539739 A0A1B0GX78 115 aa14.65□□□□□ -0.06
DDB1-216ENST00000539739 C9orf172C9J069 976 aa14.65□□□□□ -0.06
DDB1-216ENST00000539739 SAP18O00422 153 aaKnown RBP14.65□□□□□ -0.06
DDB1-216ENST00000539739 RSL1D1O76021 490 aaKnown RBP14.65□□□□□ -0.06
DDB1-216ENST00000539739 ETHE1O95571 254 aa14.65□□□□□ -0.06
DDB1-216ENST00000539739 KLK3P07288 261 aaPredicted RBP14.65□□□□□ -0.06
DDB1-216ENST00000539739 TSFMP43897 325 aaKnown RBP14.65□□□□□ -0.06
DDB1-216ENST00000539739 GCGRP47871 477 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms