RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ANKRD49Q8WVL7 239 aa14.1□□□□□ -0.15
USB1-203ENST00000539737 FBXL8Q96CD0 374 aa14.1□□□□□ -0.15
USB1-203ENST00000539737 MRRFQ96E11 262 aaKnown RBP14.1□□□□□ -0.15
USB1-203ENST00000539737 MMABQ96EY8 250 aaPredicted RBP14.1□□□□□ -0.15
USB1-203ENST00000539737 NPAS2Q99743 824 aa14.1□□□□□ -0.15
USB1-203ENST00000539737 MACROD1Q9BQ69 325 aa14.1□□□□□ -0.15
USB1-203ENST00000539737 TXLNGYQ9BZA5 131 aa14.1□□□□□ -0.15
USB1-203ENST00000539737 RUBCNLQ9H714 662 aa14.1□□□□□ -0.15
USB1-203ENST00000539737 ANKZF1Q9H8Y5 726 aa14.1□□□□□ -0.15
USB1-203ENST00000539737 ZNF180Q9UJW8 692 aa14.1□□□□□ -0.15
USB1-203ENST00000539737 OARD1Q9Y530 152 aa14.1□□□□□ -0.15
USB1-203ENST00000539737 SCN2AQ99250 2005 aa14.1□□□□□ -0.15
USB1-203ENST00000539737 SCN3AQ9NY46 2000 aa14.1□□□□□ -0.15
USB1-203ENST00000539737 IGLV3-12A0A075B6K2 115 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 A0A087X1B8 175 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 IGKV1-8A0A0C4DH67 115 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 OR2A25A4D2G3 310 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 OR5H15A6NDH6 313 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 NPIPA5E9PKD4 350 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 CDC7O00311 574 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 PRAMEF2O60811 474 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 BMP10O95393 424 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 ANXA5P08758 320 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 FAM153BP0C7A2 387 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 SLC35E2BP0CK96 405 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 CXCR2P25025 360 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 MSH2P43246 934 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 PRDX1Q06830 199 aaKnown RBP14.09□□□□□ -0.15
USB1-203ENST00000539737 BMPR2Q13873 1038 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 TSNQ15631 228 aaKnown RBP14.09□□□□□ -0.15
USB1-203ENST00000539737 FAM153CQ494X1 144 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 CAPN13Q6MZZ7 669 aaPredicted RBP14.09□□□□□ -0.15
USB1-203ENST00000539737 CMC1Q7Z7K0 106 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 CDH24Q86UP0 819 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 LRRC56Q8IYG6 542 aaPredicted RBP14.09□□□□□ -0.15
USB1-203ENST00000539737 PLCD4Q9BRC7 762 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 ENAMQ9NRM1 1142 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 SNX15Q9NRS6 342 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 IKZF3Q9UKT9 509 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 NPIPA1Q9UND3 350 aa14.09□□□□□ -0.15
USB1-203ENST00000539737 CCDC189A1A4V9 331 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 POC1B-GALNT4F8VUJ3 575 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 FOXS1O43638 330 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 LTA4HP09960 611 aaKnown RBP14.08□□□□□ -0.16
USB1-203ENST00000539737 MYBL2P10244 700 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 ESRRAP11474 423 aaPredicted RBP14.08□□□□□ -0.16
USB1-203ENST00000539737 EZRP15311 586 aaKnown RBP14.08□□□□□ -0.16
USB1-203ENST00000539737 CD1DP15813 335 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 HRH2P25021 359 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 DEKP35659 375 aaKnown RBP14.08□□□□□ -0.16
USB1-203ENST00000539737 HNMTP50135 292 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 EMP3P54852 163 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 CSHL1Q14406 222 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 NDUFA9Q16795 377 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 ZNF766Q5HY98 468 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 GARNL3Q5VVW2 1013 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 CSNK1A1LQ8N752 337 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 UHMK1Q8TAS1 419 aaKnown RBP14.08□□□□□ -0.16
USB1-203ENST00000539737 NRGNQ92686 78 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 MTFMTQ96DP5 389 aaKnown RBP14.08□□□□□ -0.16
USB1-203ENST00000539737 MVB12AQ96EY5 273 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 UBXN10Q96LJ8 280 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 EGFL8Q99944 293 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 HAUS8Q9BT25 410 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 SGPP1Q9BX95 441 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 RBCK1Q9BYM8 510 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 NMRAL1Q9HBL8 299 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 CHST11Q9NPF2 352 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 MKL2Q9ULH7 1088 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 ACOT9Q9Y305 439 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 DNHD1Q96M86 4753 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 GTF3C1Q12789 2109 aa14.08□□□□□ -0.16
USB1-203ENST00000539737 GUCA1CO95843 209 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 TLE4Q04727 773 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 NAE1Q13564 534 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 DSG2Q14126 1118 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 INAQ16352 499 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 CDKL4Q5MAI5 379 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 LGSNQ5TDP6 509 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 ABHD17BQ5VST6 288 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 SPINK14Q6IE38 97 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 LCTLQ6UWM7 567 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 RPTNQ6XPR3 784 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 C17orf64Q86WR6 236 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 TCAIMQ8N3R3 496 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 OR9A4Q8NGU2 314 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 OR56A3Q8NH54 315 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 DCAKDQ8WVC6 231 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 ISL2Q96A47 359 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 KIAA1191Q96A73 305 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 IMMP1LQ96LU5 166 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 CCDC77Q9BR77 488 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 ZNF700Q9H0M5 742 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 ATG10Q9H0Y0 220 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 C14orf105Q9NVL8 296 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 RIC8BQ9NVN3 520 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 STMN3Q9NZ72 180 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 FETUBQ9UGM5 382 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 AKAP6Q13023 2319 aa14.07□□□□□ -0.16
USB1-203ENST00000539737 LOC102723996A0A087X1L8 192 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms