RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ZNF766Q5HY98 468 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 SLCO4C1Q6ZQN7 724 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 TCAIMQ8N3R3 496 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 SLC5A8Q8N695 610 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 TTLQ8NG68 377 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 PHACTR1Q9C0D0 580 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 KLHL31Q9H511 634 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 FAM159BA6NKW6 160 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 STSP08842 583 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 SMIM10L1P0DMW3 83 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 C1GALT1C1LP0DN25 315 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 KCNK10P57789 538 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 STXBP1P61764 594 aaKnown RBP20.85■□□□□ 0.93
SCARB1-206ENST00000539320 LGI4Q8N135 537 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 SPATA6LQ8N4H0 392 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 DNAJB8Q8NHS0 232 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 GAL3ST3Q96A11 431 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 SMIM10Q96HG1 83 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 PTCHD1Q96NR3 888 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 NPAS2Q99743 824 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 TMEM79Q9BSE2 394 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 AICDAQ9GZX7 198 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 GPRC5BQ9NZH0 403 aa20.85■□□□□ 0.93
SCARB1-206ENST00000539320 CROCCQ5TZA2 2017 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 PRMT3O60678 531 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 H2AFYO75367 372 aaKnown RBP20.84■□□□□ 0.93
SCARB1-206ENST00000539320 GSTA2P09210 222 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 CCDC166P0CW27 439 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 CD1DP15813 335 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 STMN1P16949 149 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 GSTM2P28161 218 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 CASQ1P31415 396 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 ATP6V0D1P61421 351 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 TUBA3CQ13748 450 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 TUBA3EQ6PEY2 450 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 GFRALQ6UXV0 394 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 CYS1Q717R9 158 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 GPSM1Q86YR5 675 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 KRT78Q8N1N4 520 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 MDS2Q8NDY4 140 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 CCT6BQ92526 530 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 UTP23Q9BRU9 249 aaKnown RBP20.84■□□□□ 0.93
SCARB1-206ENST00000539320 RHBGQ9H310 441 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 CNOT10Q9H9A5 744 aaKnown RBP20.84■□□□□ 0.93
SCARB1-206ENST00000539320 DNAJC11Q9NVH1 559 aa20.84■□□□□ 0.93
SCARB1-206ENST00000539320 UTP11Q9Y3A2 253 aaKnown RBP20.84■□□□□ 0.93
SCARB1-206ENST00000539320 IGKV3D-11A0A0A0MRZ8 115 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 SAGE2PA6NJ88 616 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 GABRR3A8MPY1 467 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 C1QAP02745 245 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 GPX6P59796 221 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 BTG2P78543 158 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 PMP22Q01453 160 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 ZKSCAN8Q15776 578 aaPredicted RBP20.83■□□□□ 0.93
SCARB1-206ENST00000539320 CDKL4Q5MAI5 379 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 TMIGD1Q6UXZ0 262 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 C3orf62Q6ZUJ4 267 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 CTAGE3PQ8IX95 158 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 CYP4X1Q8N118 509 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 CA13Q8N1Q1 262 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 CAPS2Q9BXY5 557 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 RAB17Q9H0T7 212 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 PRDM9Q9NQV7 894 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 COPG2Q9UBF2 871 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 PCDHGB6Q9Y5F9 930 aa20.83■□□□□ 0.93
SCARB1-206ENST00000539320 A0A1B0GUH1 482 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 TCRBV16S1A1N1A0A5B0 115 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 TAPBPO15533 448 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 MAN1A2O60476 641 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 MAOAP21397 527 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 MST1P26927 711 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 COL8A1P27658 744 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 PLTPP55058 493 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 CAV1Q03135 178 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 OR4D1Q15615 310 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 OR1C1Q15619 314 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 C1QL3Q5VWW1 255 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 SULT1C3Q6IMI6 304 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 MYO7BQ6PIF6 2116 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 C17orf53Q8N3J3 647 aaPredicted RBP20.82■□□□□ 0.92
SCARB1-206ENST00000539320 ARMC2Q8NEN0 867 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 ELP5Q8TE02 316 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 SEC16BQ96JE7 1060 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 FAR2Q96K12 515 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 SIGLEC12Q96PQ1 595 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 PITHD1Q9GZP4 211 aaPredicted RBP20.82■□□□□ 0.92
SCARB1-206ENST00000539320 EHD1Q9H4M9 534 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 NT5DC2Q9H857 520 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 ANKRD10Q9NXR5 420 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 MMACHCQ9Y4U1 282 aa20.82■□□□□ 0.92
SCARB1-206ENST00000539320 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.82■□□□□ 0.92
SCARB1-206ENST00000539320 A0A0G2JN53 185 aa20.81■□□□□ 0.92
SCARB1-206ENST00000539320 ERI3O43414 337 aaKnown RBP20.81■□□□□ 0.92
SCARB1-206ENST00000539320 UNC5CO95185 931 aa20.81■□□□□ 0.92
SCARB1-206ENST00000539320 HNRNPH1P31943 449 aaKnown RBP20.81■□□□□ 0.92
SCARB1-206ENST00000539320 SPRP35270 261 aaPredicted RBP20.81■□□□□ 0.92
SCARB1-206ENST00000539320 GGT5P36269 586 aa20.81■□□□□ 0.92
SCARB1-206ENST00000539320 HSPA7P48741 367 aa20.81■□□□□ 0.92
SCARB1-206ENST00000539320 RAB10P61026 200 aa20.81■□□□□ 0.92
SCARB1-206ENST00000539320 ETF1P62495 437 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms