RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	SLC6A19	Q695T7	634 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PLAG1	Q6DJT9	500 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ADGRD1	Q6QNK2	874 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SHISA6	Q6ZSJ9	500 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TMEM151B	Q8IW70	566 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	LAS2	Q8IYD9	372 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	OR2L5	Q8NG80	312 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ZCCHC10	Q8TBK6	192 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	KCTD4	Q8WVF5	259 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MS4A6E	Q96DS6	147 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MOCOS	Q96EN8	888 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MACROD1	Q9BQ69	325 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TXLNGY	Q9BZA5	131 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PPCS	Q9HAB8	311 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PPT2	Q9UMR5	302 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NFU1	Q9UMS0	254 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MMACHC	Q9Y4U1	282 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	FLNB	O75369	2602 aa	Known RBP	11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	POLE	Q07864	2286 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SHANK1	Q9Y566	2161 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	BLACE	A4D250	179 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SUPT3H	B4E1H0	165 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	STX16-NPEPL1	H3BU86	382 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	STX16	O14662	325 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CHST10	O43529	356 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CCNT2	O60583	730 aa	Known RBP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PRAMEF4	O60810	478 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RDH16	O75452	317 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SUPT3H	O75486	399 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ZNF888	P0CJ79	500 aa	Predicted RBP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TNFRSF8	P28908	595 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PIK3CB	P42338	1070 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SNRPN	P63162	240 aa	Known RBP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CHIT1	Q13231	466 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	DOC2A	Q14183	400 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TERF2	Q15554	542 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	UAP1	Q16222	522 aa	Predicted RBP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	C18orf21	Q32NC0	220 aa	Predicted RBP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TMEM35A	Q53FP2	167 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	XKR6	Q5GH73	641 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TECRL	Q5HYJ1	363 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PRAMEF9	Q5VWM5	478 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	H3F3C	Q6NXT2	135 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RPUSD3	Q6P087	351 aa	Known RBP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PRSS58	Q8IYP2	241 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	IQCK	Q8N0W5	287 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	LGI4	Q8N135	537 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828		Q8NA96	180 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	GALNT11	Q8NCW6	608 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	M1AP	Q8TC57	530 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	DCAKD	Q8WVC6	231 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PSMF1	Q92530	271 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	HAS2	Q92819	552 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	THOC3	Q96J01	351 aa	Known RBP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	FAR2	Q96K12	515 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	BARD1	Q99728	777 aa	Known RBP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	WDR77	Q9BQA1	342 aa	Predicted RBP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	UNK	Q9C0B0	810 aa	Known RBP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ZNF160	Q9HCG1	818 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SLAMF7	Q9NQ25	335 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	HCN3	Q9P1Z3	774 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PCDHGA11	Q9Y5H2	935 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	LRRK2	Q5S007	2527 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ESPL1	Q14674	2120 aa		11.6	□□□□□ -0.55
CLTCL1-205	ENST00000538828	EXOC1L	A0A1B0GW35	172 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TTLL8	A6PVC2	850 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	UBXN8	O00124	270 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RIPK2	O43353	540 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SCEL	O95171	688 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TBX6	O95947	436 aa	Predicted RBP	11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SERPIND1	P05546	499 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MYBL2	P10244	700 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CD22	P20273	847 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	EFNA3	P52797	238 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	BMPR2	Q13873	1038 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RASA2	Q15283	850 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TLR1	Q15399	786 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NSDHL	Q15738	373 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MINDY4	Q4G0A6	757 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NADK2	Q4G0N4	442 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	GRHL2	Q6ISB3	625 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MED27	Q6P2C8	311 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TRIM40	Q6P9F5	258 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ANKRD37	Q7Z713	158 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ATCAY	Q86WG3	371 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PARP9	Q8IXQ6	854 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	EFCAB3	Q8N7B9	438 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SNX31	Q8N9S9	440 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ARMC2	Q8NEN0	867 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CPT1C	Q8TCG5	803 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ACMSD	Q8TDX5	336 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ZNF473	Q8WTR7	871 aa	Known RBP	11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	C8orf44	Q96CB5	159 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	REPS1	Q96D71	796 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PEX11G	Q96HA9	241 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	QRFPR	Q96P65	431 aa		11.59	□□□□□ -0.55

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