RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 RNF130Q86XS8 419 aa11.48□□□□□ -0.57
CPNE8-203ENST00000538596 HOMEZQ8IX15 550 aa11.48□□□□□ -0.57
CPNE8-203ENST00000538596 LGI4Q8N135 537 aa11.48□□□□□ -0.57
CPNE8-203ENST00000538596 IPCEF1Q8WWN9 437 aaPredicted RBP11.48□□□□□ -0.57
CPNE8-203ENST00000538596 IRF7Q92985 503 aa11.48□□□□□ -0.57
CPNE8-203ENST00000538596 SLC38A4Q969I6 547 aa11.48□□□□□ -0.57
CPNE8-203ENST00000538596 GTPBP3Q969Y2 492 aaKnown RBP11.48□□□□□ -0.57
CPNE8-203ENST00000538596 AP2M1Q96CW1 435 aa11.48□□□□□ -0.57
CPNE8-203ENST00000538596 BCL7BQ9BQE9 202 aa11.48□□□□□ -0.57
CPNE8-203ENST00000538596 CFHR5Q9BXR6 569 aa11.48□□□□□ -0.57
CPNE8-203ENST00000538596 EPS8L2Q9H6S3 715 aa11.48□□□□□ -0.57
CPNE8-203ENST00000538596 ASAH2Q9NR71 780 aa11.48□□□□□ -0.57
CPNE8-203ENST00000538596 ZNF226Q9NYT6 803 aa11.48□□□□□ -0.57
CPNE8-203ENST00000538596 PLXND1Q9Y4D7 1925 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 FAM227AF5H4B4 570 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 TNFRSF21O75509 655 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 KLHL18O94889 574 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 ADRA2AP08913 450 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 NPPBP16860 134 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 EIF2B2P49770 351 aaKnown RBP11.47□□□□□ -0.57
CPNE8-203ENST00000538596 SCARB2Q14108 478 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 TIGD6Q17RP2 521 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 SLC5A12Q1EHB4 618 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 ZNF284Q2VY69 593 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 SPIN4Q56A73 249 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 COLEC12Q5KU26 742 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 MED27Q6P2C8 311 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 CNKSR3Q6P9H4 555 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 SLC22A16Q86VW1 577 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 REM2Q8IYK8 340 aaPredicted RBP11.47□□□□□ -0.57
CPNE8-203ENST00000538596 CFAP206Q8IYR0 622 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 DNAJC22Q8N4W6 341 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 ATL1Q8WXF7 558 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 MAGEB10Q96LZ2 347 aaPredicted RBP11.47□□□□□ -0.57
CPNE8-203ENST00000538596 CCM2Q9BSQ5 444 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 ZSCAN5AQ9BUG6 496 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 C6orf62Q9GZU0 229 aaPredicted RBP11.47□□□□□ -0.57
CPNE8-203ENST00000538596 MIR1-1HGQ9H1L0 117 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 ABCB10Q9NRK6 738 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 PCDHGA2Q9Y5H1 932 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 WNT6Q9Y6F9 365 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 KCNE2Q9Y6J6 123 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 PRAMEF33A0A0G2JMD5 474 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 RNASET2O00584 256 aaKnown RBP11.47□□□□□ -0.57
CPNE8-203ENST00000538596 PRAMEF10O60809 474 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 PTHP01270 115 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 HSMCR30P0CW71 290 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 MAGP20916 626 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 XPAP23025 273 aaPredicted RBP11.47□□□□□ -0.57
CPNE8-203ENST00000538596 MAGEA10P43363 369 aaPredicted RBP11.47□□□□□ -0.57
CPNE8-203ENST00000538596 PRLHRP49683 370 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 TAS2R50P59544 299 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 CARTPTQ16568 116 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 CAMKMTQ7Z624 323 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 TECPR1Q7Z6L1 1165 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 KREMEN2Q8NCW0 462 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 RHOXF1Q8NHV9 184 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 MRGPRX3Q96LB0 322 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 OR51E2Q9H255 320 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 REEP4Q9H6H4 257 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 SPASTQ9UBP0 616 aa11.47□□□□□ -0.57
CPNE8-203ENST00000538596 ZNF282Q9UDV7 671 aaPredicted RBP11.47□□□□□ -0.57
CPNE8-203ENST00000538596 KIAA0100Q14667 2235 aaKnown RBP11.47□□□□□ -0.57
CPNE8-203ENST00000538596 CLDN24A6NM45 220 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 WASH3PC4AMC7 463 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 H3BM21 787 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 FGF18O76093 207 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 C1orf105O95561 183 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 KLK1P06870 262 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 ELFN1P0C7U0 828 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 HSD3B1P14060 373 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 LAG3P18627 525 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 HSD3B2P26439 372 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 PRIM2P49643 509 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 DCDC1P59894 354 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 ZNF763Q0D2J5 394 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 C2orf80Q0P641 193 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 DOC2BQ14184 412 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 OR4C15Q8NGM1 316 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.46□□□□□ -0.57
CPNE8-203ENST00000538596 DACH2Q96NX9 599 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 ROGDIQ9GZN7 287 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 SPHK2Q9NRA0 654 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 CLCA1A8K7I4 914 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 PLK4O00444 970 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 ADAMDEC1O15204 470 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 TLL1O43897 1013 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 CDK1P06493 297 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 SYN1P17600 705 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 POLR2EP19388 210 aaKnown RBP11.46□□□□□ -0.57
CPNE8-203ENST00000538596 CD40LGP29965 261 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 SOAT1P35610 550 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 SEPHS1P49903 392 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 RPS26P62854 115 aaKnown RBP11.46□□□□□ -0.57
CPNE8-203ENST00000538596 ELP6Q0PNE2 266 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 FADDQ13158 208 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 TEAD4Q15561 434 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 MICAQ29983 383 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 IFI44LQ53G44 452 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 GCNT6Q5T4J0 391 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms