RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SKP1P63208 163 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 SIX1Q15475 284 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 TRIP13Q15645 432 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 TPSAB1Q15661 275 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 CCNG2Q16589 344 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 C4orf22Q6V702 233 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 QSOX2Q6ZRP7 698 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 ZFP62Q8NB50 900 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 NFAM1Q8NET5 270 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 OR5M9Q8NGP3 310 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 OR10Q1Q8NGQ4 319 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 FOXC2Q99958 501 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 GRPEL1Q9HAV7 217 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 DNAJB12Q9NXW2 375 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 KCMF1Q9P0J7 381 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 SAMD15Q9P1V8 674 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 FBXW2Q9UKT8 454 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 EML6Q6ZMW3 1958 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 HRNRQ86YZ3 2850 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 TCRBV16S1A1N1A0A5B0 115 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 NPIPA2E9PIF3 369 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 NPIPA3F8WFD2 350 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 PSMD12O00232 456 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 SLC16A5O15375 505 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 KLK8O60259 260 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 ITGA10O75578 1167 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 MYO1DO94832 1006 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 DRD2P14416 443 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 NPPBP16860 134 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 HNF4AP41235 474 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 KCNJ1P48048 391 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 VPS41P49754 854 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 CCR8P51685 355 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 RAB8AP61006 207 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 CDK16Q00536 496 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 FOLH1Q04609 750 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 CEBPEQ15744 281 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 LCTLQ6UWM7 567 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 ACAD11Q709F0 780 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 CLYBLQ8N0X4 340 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 TXLNBQ8N3L3 684 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 EEF1AKMT1Q8WVE0 214 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 SREK1Q8WXA9 508 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 PYCR2Q96C36 320 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 BAG1Q99933 345 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 SGPP1Q9BX95 441 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 CXXC4Q9H2H0 198 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 LIME1Q9H400 295 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 NECTIN3Q9NQS3 549 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 PNPLA3Q9NST1 481 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 DEPPQ9NTK1 212 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 ERVK-11Q9UQG0 969 aa13.06□□□□□ -0.32
SMARCA4-206ENST00000538456 VPS13CQ709C8 3753 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 IGKV3D-11A0A0A0MRZ8 115 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 FAM237BA0A1B0GVD1 139 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 FAM221AA4D161 298 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 PINLYPA6NC86 204 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 TUBB4AP04350 444 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 CCND1P24385 295 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 CLCN2P51788 898 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 ZNF75DP51815 510 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 PPIAP62937 165 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 PLGLB1Q02325 96 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 RGS1Q08116 209 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 PWP1Q13610 501 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 SNTB1Q13884 538 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 PHKG1Q16816 387 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 ZNF585AQ6P3V2 769 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 C16orf47Q6ZP98 133 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 ABHD13Q7L211 337 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 PALM2Q8IXS6 379 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 ZZZ3Q8IYH5 903 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 ARMC10Q8N2F6 343 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 APCDD1LQ8NCL9 501 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 ARMC2Q8NEN0 867 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 B3GNT7Q8NFL0 401 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 PWWP2AQ96N64 755 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 NDNQ99608 321 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 HAUS8Q9BT25 410 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 POLDIP3Q9BY77 421 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 SLC6A16Q9GZN6 736 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 RBSNQ9H1K0 784 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 GSX1Q9H4S2 264 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 PARVBQ9HBI1 364 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 TIMMDC1Q9NPL8 285 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 PRDM9Q9NQV7 894 aa13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 TRMT6Q9UJA5 497 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-206ENST00000538456 A0A0G2JMM0 328 aa13.04□□□□□ -0.32
SMARCA4-206ENST00000538456 A0A1W2PPB8 328 aa13.04□□□□□ -0.32
SMARCA4-206ENST00000538456 A0A1W2PRS3 328 aa13.04□□□□□ -0.32
SMARCA4-206ENST00000538456 TRBC2A0A5B9 178 aa13.04□□□□□ -0.32
SMARCA4-206ENST00000538456 CTAGE15A4D2H0 777 aa13.04□□□□□ -0.32
SMARCA4-206ENST00000538456 KIR3DP1A8MWS1 328 aa13.04□□□□□ -0.32
SMARCA4-206ENST00000538456 G3V3Y1 287 aa13.04□□□□□ -0.32
SMARCA4-206ENST00000538456 ACOT7O00154 380 aa13.04□□□□□ -0.32
SMARCA4-206ENST00000538456 CTAG2O75638 210 aa13.04□□□□□ -0.32
SMARCA4-206ENST00000538456 HAUS5O94927 633 aa13.04□□□□□ -0.32
SMARCA4-206ENST00000538456 C8GP07360 202 aa13.04□□□□□ -0.32
SMARCA4-206ENST00000538456 RNH1P13489 461 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms