RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 PIGVQ9NUD9 493 aa10.94□□□□□ -0.66
SEMA4D-221ENST00000537934 SIRT5Q9NXA8 310 aa10.94□□□□□ -0.66
SEMA4D-221ENST00000537934 CLCA3PQ9Y6N3 262 aa10.94□□□□□ -0.66
SEMA4D-221ENST00000537934 COL4A6Q14031 1691 aa10.94□□□□□ -0.66
SEMA4D-221ENST00000537934 TRAV19A0A0A6YYK7 116 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 FAM240BA0A1B0GVZ2 78 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 YJEFN3A6XGL0 299 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 SUPT3HB4E1H0 165 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 AGRPO00253 132 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 PCDH17O14917 1159 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 PER2O15055 1255 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 KERAO60938 352 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 HMGN1P05114 100 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 PRKAR1AP10644 381 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 RPL17P18621 184 aaKnown RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 RAB3AP20336 220 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 PXNP49023 591 aaPredicted RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 POLR2GP62487 172 aaKnown RBP eCLIP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ABATP80404 500 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ZNF33AQ06730 810 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 EXOSC2Q13868 293 aaKnown RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 RTP2Q5QGT7 225 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 NADSYN1Q6IA69 706 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 GPR153Q6NV75 609 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 RSPO2Q6UXX9 243 aaPredicted RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 TIGD4Q8IY51 512 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 PHACTR4Q8IZ21 702 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 C19orf18Q8NEA5 215 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 SCAMP5Q8TAC9 235 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 MSLNLQ96KJ4 702 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 RPRD1AQ96P16 312 aaPredicted RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 SECISBP2Q96T21 854 aaKnown RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 SLC9A7Q96T83 725 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 FAM129BQ96TA1 746 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 C1QTNF3Q9BXJ4 246 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 GLOD4Q9HC38 313 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 CSNK1G1Q9HCP0 422 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 EXOSC4Q9NPD3 245 aaKnown RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 PRELID3BQ9Y3B1 194 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ACTL7AQ9Y615 435 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ZNF670-ZNF695F2Z2N8 137 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 H3BM21 787 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 CCNDBP1O95273 360 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 FABP3P05413 133 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 CTXN3Q4LDR2 81 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 RANBP10Q6VN20 620 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 OTOP2Q7RTS6 562 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 DDX53Q86TM3 631 aaKnown RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ZZZ3Q8IYH5 903 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 TTC9BQ8N6N2 239 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 STAG3L4Q8TBR4 150 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 NTAN1Q96AB6 310 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 FAM120BQ96EK7 910 aaKnown RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ZBTB18Q99592 522 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ZNF416Q9BWM5 594 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 COLEC11Q9BWP8 271 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 FSD1LQ9BXM9 530 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ELOVL6Q9H5J4 265 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 FANCFQ9NPI8 374 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 RAD18Q9NS91 495 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 PTTG3PQ9NZH4 202 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 NLKQ9UBE8 527 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ACSL5Q9ULC5 683 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 NDRG2Q9UN36 371 aaKnown RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 SHROOM3Q8TF72 1996 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 A0A1W2PQL4 384 aaPredicted RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 E9PAM4 449 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 GFRA2O00451 464 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 PLOD3O60568 738 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 DIRAS1O95057 198 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ZNF682O95780 498 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 LGI1O95970 557 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 SUOXP51687 545 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ERVK-21P61565 698 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 TIAL1Q01085 375 aaKnown RBP eCLIP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 SCRN3Q0VDG4 424 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 SCAPQ12770 1279 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 CSTF3Q12996 717 aaKnown RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 RBBP7Q16576 425 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 RAB41Q5JT25 222 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 SDHAF4Q5VUM1 108 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 RETSATQ6NUM9 610 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 Q6ZPB1 254 aaPredicted RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 LDB1Q86U70 411 aaPredicted RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 SPATA2LQ8IUW3 424 aaPredicted RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 DENND6BQ8NEG7 585 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 CREB3L4Q8TEY5 395 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 KIAA1191Q96A73 305 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ZBED6CLQ96FA7 236 aaPredicted RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 PPP1R2P1Q96PQ5 205 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 KCNC2Q96PR1 638 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 GFM1Q96RP9 751 aaKnown RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 CLEC4MQ9H2X3 399 aaPredicted RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 CWH43Q9H720 699 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 POPDC3Q9HBV1 291 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 ZFP64Q9NPA5 681 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 PCDHB16Q9NRJ7 776 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 THUMPD1Q9NXG2 353 aaKnown RBP10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 RDH8Q9NYR8 311 aa10.93□□□□□ -0.66
SEMA4D-221ENST00000537934 TAS2R16Q9NYV7 291 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms