RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 TBC1D24Q9ULP9 559 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 YIPF1Q9Y548 306 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 SLC35F4A4IF30 521 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 RNASET2O00584 256 aaKnown RBP11.68□□□□□ -0.54
CPSF7-218ENST00000537641 SCO2O43819 266 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 SOD2P04179 222 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 IRF1P10914 325 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 HLA-EP13747 358 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 MAGP20916 626 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 ENDOUP21128 410 aaKnown RBP11.68□□□□□ -0.54
CPSF7-218ENST00000537641 PRIM2P49643 509 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 CCL23P55773 120 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 RHAGQ02094 409 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 IRF8Q02556 426 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 PLD1Q13393 1074 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 VEPH1Q14D04 833 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 SOWAHCQ53LP3 525 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-218ENST00000537641 GCNT6Q5T4J0 391 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 LRRC66Q68CR7 880 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 GRHL2Q6ISB3 625 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 RETSATQ6NUM9 610 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 ZNF517Q6ZMY9 492 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-218ENST00000537641 SPATC1Q76KD6 591 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 METTL3Q86U44 580 aaKnown RBP11.68□□□□□ -0.54
CPSF7-218ENST00000537641 RAB43Q86YS6 212 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 B3GNT7Q8NFL0 401 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 UTP15Q8TED0 518 aaKnown RBP11.68□□□□□ -0.54
CPSF7-218ENST00000537641 COQ8BQ96D53 544 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 C11orf24Q96F05 449 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-218ENST00000537641 OR2A14Q96R47 310 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 NIPSNAP1Q9BPW8 284 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 TM6SF2Q9BZW4 377 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 RNF38Q9H0F5 515 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 MIR1-1HGQ9H1L0 117 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 ABCG8Q9H221 673 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 AMBNQ9NP70 447 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 CLN6Q9NWW5 311 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 MS4A12Q9NXJ0 267 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 SLC22A14Q9Y267 594 aa11.68□□□□□ -0.54
CPSF7-218ENST00000537641 CFAP20Q9Y6A4 193 aaKnown RBP11.68□□□□□ -0.54
CPSF7-218ENST00000537641 ZAR1LA6NP61 321 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 GFYI3L273 518 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 ARHGAP33O14559 1287 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 KPNA5O15131 536 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 YY2O15391 372 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 HOXC11O43248 304 aaPredicted RBP11.67□□□□□ -0.54
CPSF7-218ENST00000537641 GCM2O75603 506 aaPredicted RBP11.67□□□□□ -0.54
CPSF7-218ENST00000537641 CCNB2O95067 398 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 IGSF6O95976 241 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 SRPRAP08240 638 aaKnown RBP11.67□□□□□ -0.54
CPSF7-218ENST00000537641 HSMCR30P0CW71 290 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 CBLP22681 906 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 CHMP24386 653 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 LIMS1P48059 325 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 CDH12P55289 794 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 PFN3P60673 137 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 B4GALNT1Q00973 533 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 GAB1Q13480 694 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 CDK10Q15131 360 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 ZFP69Q49AA0 526 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 BCL7AQ4VC05 210 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 ZDHHC20Q5W0Z9 365 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 FAM92BQ6ZTR7 304 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 RASGRP3Q8IV61 690 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 C1orf52Q8N6N3 182 aaKnown RBP11.67□□□□□ -0.54
CPSF7-218ENST00000537641 ASCC1Q8N9N2 400 aaKnown RBP11.67□□□□□ -0.54
CPSF7-218ENST00000537641 GPR26Q8NDV2 337 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 GOT1L1Q8NHS2 421 aaPredicted RBP11.67□□□□□ -0.54
CPSF7-218ENST00000537641 GEMIN6Q8WXD5 167 aaKnown RBP11.67□□□□□ -0.54
CPSF7-218ENST00000537641 BHLHE41Q9C0J9 482 aaPredicted RBP11.67□□□□□ -0.54
CPSF7-218ENST00000537641 NDEL1Q9GZM8 345 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 TMEM184CQ9NVA4 438 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 HCN4Q9Y3Q4 1203 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 LTBP2Q14767 1821 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 DENND4CQ5VZ89 1909 aa11.67□□□□□ -0.54
CPSF7-218ENST00000537641 C2orf78A6NCI8 922 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 HMX3A6NHT5 357 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 H0YIV9 168 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 TNFRSF21O75509 655 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 IFNA14P01570 189 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 IDSP22304 550 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 ITPKAP23677 461 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 SERPINA4P29622 427 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 TNFSF8P32971 234 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 HMGA2P52926 109 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 PNLIPRP1P54315 467 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 MED22Q15528 200 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 SPIN4Q56A73 249 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 MEDAGQ5VYS4 303 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 PLAG1Q6DJT9 500 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 ERAP2Q6P179 960 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.66□□□□□ -0.54
CPSF7-218ENST00000537641 TPRG1Q6ZUI0 275 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 ANKRD33Q7Z3H0 272 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 DEFB128Q7Z7B8 93 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 FAM181AQ8N9Y4 354 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 OR52N2Q8NGI0 321 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 OR4A15Q8NGL6 344 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 CDC26Q8NHZ8 85 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 WDR36Q8NI36 951 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms