RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 RPS6KA6Q9UK32 745 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 CEP290O15078 2479 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 A0A1W2PP55 124 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 RFXAPO00287 272 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 SLC1A7O00341 560 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 PAK4O96013 591 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-202ENST00000535906 INHBBP09529 407 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 ZNF182P17025 639 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-202ENST00000535906 AGXTP21549 392 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 SOX9P48436 509 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 PLA2G16P53816 162 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 C2orf80Q0P641 193 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 BNIP3Q12983 259 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 TMED1Q13445 227 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 CAMK2GQ13555 558 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-202ENST00000535906 PRSS53Q2L4Q9 553 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 OR2T5Q6IEZ7 315 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 FAM71E1Q6IPT2 247 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 PARM1Q6UWI2 310 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 EIF3MQ7L2H7 374 aaKnown RBP12.81□□□□□ -0.36
VPS33B-202ENST00000535906 ZC3H7AQ8IWR0 971 aaKnown RBP12.81□□□□□ -0.36
VPS33B-202ENST00000535906 OR2T29Q8NH02 315 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 FBLIM1Q8WUP2 373 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 HSH2DQ96JZ2 352 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 DZANK1Q9NVP4 752 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 TAC3Q9UHF0 121 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 VPS4AQ9UN37 437 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 NAALAD2Q9Y3Q0 740 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 EYSQ5T1H1 3165 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 BCKDKO14874 412 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 DNAJB5O75953 348 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 FKBP9O95302 570 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 C6orf47O95873 294 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 TBX6O95947 436 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-202ENST00000535906 FUCA1P04066 466 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 FABP3P05413 133 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 CCDC159P0C7I6 412 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 ERGP11308 486 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 AQP1P29972 269 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 GDI1P31150 447 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 EIF2DP41214 584 aaKnown RBP12.81□□□□□ -0.36
VPS33B-202ENST00000535906 MVDP53602 400 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 ENPP2Q13822 863 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 PDE7AQ13946 482 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 FGL2Q14314 439 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 COX20Q5RI15 118 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 HDDC3Q8N4P3 179 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 OXR1Q8N573 874 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 ZNF513Q8N8E2 541 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-202ENST00000535906 KLK6Q92876 244 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 BORCS5Q969J3 196 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 ZNF566Q969W8 418 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 MENTQ9BUN1 341 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 TEX101Q9BY14 249 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 TRIT1Q9H3H1 467 aaKnown RBP12.81□□□□□ -0.36
VPS33B-202ENST00000535906 TM9SF3Q9HD45 589 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 ZNF282Q9UDV7 671 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-202ENST00000535906 RAPGEFL1Q9UHV5 662 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 PSME2Q9UL46 239 aa12.81□□□□□ -0.36
VPS33B-202ENST00000535906 ZFR2Q9UPR6 939 aaKnown RBP12.81□□□□□ -0.36
VPS33B-202ENST00000535906 CKAP5Q14008 2032 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 GCM2O75603 506 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-202ENST00000535906 APODP05090 189 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 PPIBP23284 216 aaKnown RBP12.8□□□□□ -0.36
VPS33B-202ENST00000535906 IGFBP5P24593 272 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 PSMB5P28074 263 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 MAPK10P53779 464 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 MOGQ16653 247 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 DUS1LQ6P1R4 473 aaKnown RBP12.8□□□□□ -0.36
VPS33B-202ENST00000535906 ANGPTL8Q6UXH0 198 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 CYP4Z1Q86W10 505 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 MMP21Q8N119 569 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 PIK3C3Q8NEB9 887 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 GOT1L1Q8NHS2 421 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-202ENST00000535906 MUL1Q969V5 352 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 PPCDCQ96CD2 204 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 TPD52L3Q96J77 140 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 MYNNQ9NPC7 610 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 CUEDC1Q9NWM3 386 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-202ENST00000535906 SPASTQ9UBP0 616 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 CORO2BQ9UQ03 480 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 SNX5Q9Y5X3 404 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 PLXND1Q9Y4D7 1925 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 MYO1GB0I1T2 1018 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 TMEM229AB2RXF0 380 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 LATO43561 262 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 MITFO75030 526 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-202ENST00000535906 UGT2B11O75310 529 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 BCL10O95999 233 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 ITIH1P19827 911 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 PTX3P26022 381 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-202ENST00000535906 CRATP43155 626 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 CLCNKAP51800 687 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 ARHGDIAP52565 204 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 IRF4Q15306 451 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 C17orf64Q86WR6 236 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 ANKRD53Q8N9V6 530 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 MIPOL1Q8TD10 442 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 UBE2E3Q969T4 207 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 NODALQ96S42 347 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms