RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 EEF2P13639 858 aaKnown RBP4.03□□□□□ -1.76
PRKDC-205ENST00000535375 FEN1P39748 380 aaKnown RBP4.03□□□□□ -1.76
PRKDC-205ENST00000535375 CRKLP46109 303 aaKnown RBP4.03□□□□□ -1.76
PRKDC-205ENST00000535375 OR3A3P47888 321 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 RIDAP52758 137 aaKnown RBP4.03□□□□□ -1.76
PRKDC-205ENST00000535375 GRB14Q14449 540 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 EIPR1Q53HC9 387 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 SPANXN4Q5MJ08 99 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.03□□□□□ -1.76
PRKDC-205ENST00000535375 TRMT11Q7Z4G4 463 aaKnown RBP4.03□□□□□ -1.76
PRKDC-205ENST00000535375 COX8CQ7Z4L0 72 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 GPR141Q7Z602 305 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 C5orf24Q7Z6I8 188 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 TEX26Q8N6G2 289 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 HEXDCQ8WVB3 486 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 SIPA1Q96FS4 1042 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 LURAP1Q96LR2 239 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 MGME1Q9BQP7 344 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 DPEP2Q9H4A9 486 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 KCNK13Q9HB14 408 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 PDRG1Q9NUG6 133 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 SATB2Q9UPW6 733 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 MRPS18CQ9Y3D5 142 aaKnown RBP4.03□□□□□ -1.76
PRKDC-205ENST00000535375 AUP1Q9Y679 476 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 HEG1Q9ULI3 1381 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 ARHGEF33A8MVX0 844 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 PRSS46E5RG02 174 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 PGRMC2O15173 223 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 PPIP5K2O43314 1243 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 TNFSF12O43508 249 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 IGKV3-15P01624 115 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 RPN1P04843 607 aaKnown RBP4.02□□□□□ -1.77
PRKDC-205ENST00000535375 BTG1P62324 171 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 PPA1Q15181 289 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 MLF2Q15773 248 aaPredicted RBP4.02□□□□□ -1.77
PRKDC-205ENST00000535375 LBHQ53QV2 105 aaPredicted RBP4.02□□□□□ -1.77
PRKDC-205ENST00000535375 C15orf52Q6ZUT6 534 aaKnown RBP4.02□□□□□ -1.77
PRKDC-205ENST00000535375 Q71RC1 249 aaPredicted RBP4.02□□□□□ -1.77
PRKDC-205ENST00000535375 CEACAM19Q7Z692 300 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 SUMF1Q8NBK3 374 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 NCOA7Q8NI08 942 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 PCDHB18PQ96TA0 734 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 RBM24Q9BX46 236 aaKnown RBP4.02□□□□□ -1.77
PRKDC-205ENST00000535375 OCR1Q9BZK8 76 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 LRRCC1Q9C099 1032 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 STRADBQ9C0K7 418 aa4.02□□□□□ -1.77
PRKDC-205ENST00000535375 DBF4Q9UBU7 674 aaPredicted RBP4.02□□□□□ -1.77
PRKDC-205ENST00000535375 SIGLEC5O15389 551 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 APOA4P06727 396 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 MELTFP08582 738 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 VIMP08670 466 aaKnown RBP4.01□□□□□ -1.77
PRKDC-205ENST00000535375 NPY4RP50391 375 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 ZNF41P51814 821 aaPredicted RBP4.01□□□□□ -1.77
PRKDC-205ENST00000535375 CAPZA1P52907 286 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 NAGLUP54802 743 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 PSMD6Q15008 389 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 LRRC37A5PQ49AS3 106 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 C1QTNF12Q5T7M4 302 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 FAM46CQ5VWP2 391 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 SHEQ5VZ18 495 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 FAM91A1Q658Y4 838 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 TCEAL6Q6IPX3 200 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 BTNL8Q6UX41 500 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 DZIP1Q86YF9 867 aaKnown RBP4.01□□□□□ -1.77
PRKDC-205ENST00000535375 TIGD4Q8IY51 512 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 C4orf32Q8N8J7 132 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 HNRNPABQ99729 332 aaKnown RBP4.01□□□□□ -1.77
PRKDC-205ENST00000535375 EDEM3Q9BZQ6 932 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 PNNQ9H307 717 aaKnown RBP4.01□□□□□ -1.77
PRKDC-205ENST00000535375 UBQLN3Q9H347 655 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 MOB1AQ9H8S9 216 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 IL1RAPQ9NPH3 570 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 PILRAQ9UKJ1 303 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 TSPAN16Q9UKR8 245 aa4.01□□□□□ -1.77
PRKDC-205ENST00000535375 A0A087WV48 116 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 ARHGEF37A1IGU5 675 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 CCER2I3L3R5 266 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 ZNF749O43361 778 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 FCGR3BO75015 233 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 SP9P0CG40 484 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 SELEP16581 610 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 GMPSP49915 693 aaPredicted RBP4□□□□□ -1.77
PRKDC-205ENST00000535375 ABCE1P61221 599 aaKnown RBP4□□□□□ -1.77
PRKDC-205ENST00000535375 Q6ZVQ6 151 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 TMUB2Q71RG4 321 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 ADCK1Q86TW2 530 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 ZNF584Q8IVC4 421 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 DND1Q8IYX4 353 aaKnown RBP4□□□□□ -1.77
PRKDC-205ENST00000535375 SSC4DQ8WTU2 575 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 C1orf147Q96MC9 270 aaPredicted RBP4□□□□□ -1.77
PRKDC-205ENST00000535375 TSSK2Q96PF2 358 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 INPP5KQ9BT40 448 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 SP140LQ9H930 580 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 GMEB2Q9UKD1 530 aa4□□□□□ -1.77
PRKDC-205ENST00000535375 TRGV8A0A0C4DH27 118 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 PHOX2AO14813 284 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 SH3BGRLO75368 114 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 GBAP04062 536 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 QDPRP09417 244 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 CD1DP15813 335 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms