RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PELI2Q9HAT8 420 aa9.46□□□□□ -0.9
CLSTN3-203ENST00000534830 CLK4Q9HAZ1 481 aaKnown RBP9.46□□□□□ -0.9
CLSTN3-203ENST00000534830 POPDC3Q9HBV1 291 aa9.46□□□□□ -0.9
CLSTN3-203ENST00000534830 MMP25Q9NPA2 562 aa9.46□□□□□ -0.9
CLSTN3-203ENST00000534830 STMN3Q9NZ72 180 aa9.46□□□□□ -0.9
CLSTN3-203ENST00000534830 ZFATQ9P243 1243 aa9.46□□□□□ -0.9
CLSTN3-203ENST00000534830 C19orf25Q9UFG5 118 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-203ENST00000534830 PYCARDQ9ULZ3 195 aa9.46□□□□□ -0.9
CLSTN3-203ENST00000534830 OARD1Q9Y530 152 aa9.46□□□□□ -0.9
CLSTN3-203ENST00000534830 OR5H15A6NDH6 313 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 EFCAB8A8MWE9 144 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 C4orf51C9J302 202 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 NDUFS4O43181 175 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 CHST10O43529 356 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 CLDN14O95500 239 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 B3GALT4O96024 378 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 F10P00742 488 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 C1QAP02745 245 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 FHP07954 510 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 PAFAH1B1P43034 410 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 SLC6A12P48065 614 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 ADORA2A-AS1P86434 159 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 CSHL1Q14406 222 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 USP10Q14694 798 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 EXT1Q16394 746 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 BTBD16Q32M84 506 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 SFT2D3Q587I9 215 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 ABHD17BQ5VST6 288 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 NIPAL1Q6NVV3 410 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 DNAJB8Q8NHS0 232 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 ELP5Q8TE02 316 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 TSLPQ969D9 159 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 RHBDF1Q96CC6 855 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 ZNF354BQ96LW1 612 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 KRT12Q99456 494 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 REPIN1Q9BWE0 567 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 TRIM31Q9BZY9 425 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 DERL2Q9GZP9 239 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 RHOJQ9H4E5 214 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 KLHL31Q9H511 634 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 NSMCE4AQ9NXX6 385 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 ABI3Q9P2A4 366 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 SEC14L3Q9UDX4 400 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 SLC22A14Q9Y267 594 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 SNX24Q9Y343 169 aa9.45□□□□□ -0.9
CLSTN3-203ENST00000534830 NCOA6Q14686 2063 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 ABCA4P78363 2273 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 IGKV3D-11A0A0A0MRZ8 115 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 NPEPPSL1A6NEC2 478 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 ZNF860A6NHJ4 632 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 TMEM200CA6NKL6 621 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 CXorf49A8MYA2 514 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 CDK2AP1O14519 115 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 NDC80O14777 642 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 EIF3HO15372 352 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 MAN1A2O60476 641 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 PRAMEF2O60811 474 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 CDC123O75794 336 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 WISP2O76076 250 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 TBX6O95947 436 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 SERPINA6P08185 405 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 ZNF888P0CJ79 500 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 AGAP20933 346 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 MST1P26927 711 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 GGT5P36269 586 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 HNMTP50135 292 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 SLC26A5P58743 744 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 PPP2R2AP63151 447 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 POU4F1Q01851 419 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 SRSF11Q05519 484 aaKnown RBP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 RBPJQ06330 500 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 RGS1Q08116 209 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 ILF2Q12905 390 aaKnown RBP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 ABRAXAS2Q15018 415 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 CDSNQ15517 529 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 NSDHLQ15738 373 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 DEFB134Q4QY38 66 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 ACER2Q5QJU3 275 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 MFSD4BQ5TF39 518 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 PAPD4Q6PIY7 484 aaKnown RBP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 MEX3BQ6ZN04 569 aaKnown RBP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 QSOX2Q6ZRP7 698 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 ABHD13Q7L211 337 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 TAOK1Q7L7X3 1001 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 TGIF2LYQ8IUE0 185 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 CRLF3Q8IUI8 442 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 ZBED8Q8IZ13 594 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 BEST3Q8N1M1 668 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 TBC1D19Q8N5T2 526 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 BBOF1Q8ND07 529 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 MDS2Q8NDY4 140 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 TRPV3Q8NET8 790 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 TBC1D20Q96BZ9 403 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 SCMH1Q96GD3 660 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 VPS39Q96JC1 886 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 TSNARE1Q96NA8 513 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 SPOCK3Q9BQ16 436 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 AIF1LQ9BQI0 150 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 ERP44Q9BS26 406 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms