RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 LIPIQ6XZB0 460 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 TMPRSS11AQ6ZMR5 421 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 GLT6D1Q7Z4J2 308 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 CCDC117Q8IWD4 279 aaPredicted RBP8.71□□□□□ -1.02
SF3B2-216ENST00000534765 LINC00518Q8N0U6 118 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 KBTBD8Q8NFY9 601 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 FIBINQ8TAL6 211 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 STYXQ8WUJ0 223 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 NKX2-4Q9H2Z4 354 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 NLE1Q9NVX2 485 aaPredicted RBP8.71□□□□□ -1.02
SF3B2-216ENST00000534765 KCTD5Q9NXV2 234 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 SLC23A1Q9UHI7 598 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 ING4Q9UNL4 249 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 PIPSLA2A3N6 862 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 HMX3A6NHT5 357 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 SPINT1O43278 529 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 GRID2O43424 1007 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 FOSL2P15408 326 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 F8A1P23610 371 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 NNMTP40261 264 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 CTAG1AP78358 180 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 LIPEQ05469 1076 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 TARDBPQ13148 414 aaKnown RBP eCLIP8.71□□□□□ -1.02
SF3B2-216ENST00000534765 CLCA4Q14CN2 919 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 ATP6AP1Q15904 470 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 FAM78AQ5JUQ0 283 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 STX19Q8N4C7 294 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 MFSD2AQ8NA29 543 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 ATG16L2Q8NAA4 619 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 SIDT2Q8NBJ9 832 aaKnown RBP8.71□□□□□ -1.02
SF3B2-216ENST00000534765 GPR26Q8NDV2 337 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 LHFPL5Q8TAF8 219 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 HMGCLL1Q8TB92 370 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 NANPQ8TBE9 248 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 FRS2Q8WU20 508 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 SLC7A6Q92536 515 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 FOXJ1Q92949 421 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 MMP27Q9H306 513 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 IGFLR1Q9H665 355 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 OXSMQ9NWU1 459 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 PABPN1LA6NDY0 278 aaKnown RBP8.7□□□□□ -1.02
SF3B2-216ENST00000534765 GADD45AP24522 165 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 PRDX3P30048 256 aaKnown RBP8.7□□□□□ -1.02
SF3B2-216ENST00000534765 RHOAP61586 193 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 B4GALNT1Q00973 533 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 PTSQ03393 145 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 SCN1BQ07699 218 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 CDC20Q12834 499 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 MED22Q15528 200 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 TECRLQ5HYJ1 363 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 INTS11Q5TA45 600 aaKnown RBP8.7□□□□□ -1.02
SF3B2-216ENST00000534765 BRAT1Q6PJG6 821 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 PAQR3Q6TCH7 311 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 FAM151BQ6UXP7 276 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 TMEM151BQ8IW70 566 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 SLC37A3Q8NCC5 494 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 HJURPQ8NCD3 748 aaPredicted RBP8.7□□□□□ -1.02
SF3B2-216ENST00000534765 TP53INP1Q96A56 240 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 RIPOR3Q96MK2 946 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 ZNF599Q96NL3 588 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 NRTNQ99748 197 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 MYOCQ99972 504 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 YTHDF1Q9BYJ9 559 aaKnown RBP8.7□□□□□ -1.02
SF3B2-216ENST00000534765 SCML1Q9UN30 329 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 PPIEQ9UNP9 301 aaKnown RBP8.7□□□□□ -1.02
SF3B2-216ENST00000534765 COPS3Q9UNS2 423 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 MGAT4BQ9UQ53 548 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 PCDHGA9Q9Y5G4 932 aaKnown RBP8.7□□□□□ -1.02
SF3B2-216ENST00000534765 PCYT1BQ9Y5K3 369 aaPredicted RBP8.7□□□□□ -1.02
SF3B2-216ENST00000534765 PEX16Q9Y5Y5 336 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 PLXNA2O75051 1894 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 H7C2Y5 167 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 CDC7O00311 574 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 TO15178 435 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 EFCAB14O75071 495 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 AGTR2P50052 363 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 STC1P52823 247 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 NUDT6P53370 316 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 RPS7P62081 194 aaKnown RBP8.7□□□□□ -1.02
SF3B2-216ENST00000534765 CTF1Q16619 201 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 SPATS1Q496A3 300 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 YIF1BQ5BJH7 314 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 XAF1Q6GPH4 301 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 DCBLD1Q8N8Z6 715 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 DCAF4L2Q8NA75 395 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 OR2A12Q8NGT7 310 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 OR4L1Q8NH43 312 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 CEP76Q8TAP6 659 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 KCNA7Q96RP8 456 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 SLC30A2Q9BRI3 323 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 ALG9Q9H6U8 611 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 IL26Q9NPH9 171 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 SNTG1Q9NSN8 517 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 IL17CQ9P0M4 197 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 EIF3KQ9UBQ5 218 aaKnown RBP8.7□□□□□ -1.02
SF3B2-216ENST00000534765 VTI1BQ9UEU0 232 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 KLF15Q9UIH9 416 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 ZNF225Q9UK10 706 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 BTRCQ9Y297 605 aa8.7□□□□□ -1.02
SF3B2-216ENST00000534765 GNB5O14775 395 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms