RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	OARD1	Q9Y530	152 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	LEPR	P48357	1165 aa	Known RBP	15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GBX1	Q14549	363 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	KLHDC10	Q6PID8	442 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ABCB9	Q9NP78	766 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	EPHA6	Q9UF33	1036 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PDE10A	Q9Y233	779 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OR1A2	Q9Y585	309 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	C1orf226	A1L170	272 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SRC	P12931	536 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OR3A3	P47888	321 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OR3A2	P47893	321 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CCDC116	Q8IYX3	515 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PCDHGB2	Q9Y5G2	931 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CIB4	A0PJX0	185 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NPIPA2	E9PIF3	369 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZNF670-ZNF695	F2Z2N8	137 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NPIPA3	F8WFD2	350 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SEMA3D	O95025	777 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CRTC2	Q53ET0	693 aa	Predicted RBP	15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TMEM35A	Q53FP2	167 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GALNT12	Q8IXK2	581 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OR5P2	Q8WZ92	322 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	EBF4	Q9BQW3	602 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CHCHD6	Q9BRQ6	235 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	HSD3B7	Q9H2F3	369 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	UPB1	Q9UBR1	384 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532		P04436	131 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CYP17A1	P05093	508 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ADAM8	P78325	824 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PERM1	Q5SV97	790 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RBM44	Q6ZP01	1051 aa	Known RBP	15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RAB43	Q86YS6	212 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	DCP2	Q8IU60	420 aa	Known RBP	15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OR2L3	Q8NG85	312 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SCRN2	Q96FV2	425 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZNF382	Q96SR6	550 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	WDR12	Q9GZL7	423 aa	Known RBP	15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	POFUT2	Q9Y2G5	429 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	UQCRC2	P22695	453 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SLC6A6	P31641	620 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	EIF2B2	P49770	351 aa	Known RBP	15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FCHO2	Q0JRZ9	810 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ADGRE1	Q14246	886 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CST9	Q5W186	159 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	REEP3	Q6NUK4	255 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	HORMAD2	Q8N7B1	307 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TBX5	Q99593	518 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	COPS4	Q9BT78	406 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	HCFC1R1	Q9NWW0	138 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZDHHC2	Q9UIJ5	367 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FAM240B	A0A1B0GVZ2	78 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ARSA	P15289	507 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TBPL1	P62380	186 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SLAMF1	Q13291	335 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OR52E8	Q6IFG1	317 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GORASP1	Q9BQQ3	440 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TMLHE	Q9NVH6	421 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RIMKLB	Q9ULI2	386 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CER1	O95813	267 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ITGB1	P05556	798 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GABRA3	P34903	492 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	STAR	P49675	285 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ADAR	P55265	1226 aa	Known RBP	15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZNF678	Q5SXM1	525 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	THAP3	Q8WTV1	239 aa	Predicted RBP	15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZNF576	Q9H609	170 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PCDHB16	Q9NRJ7	776 aa		15.17	■□□□□ 0.02
NCAPD3-213	ENST00000534532	EFCAB9	A8MZ26	197 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SOCS7	O14512	581 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TXNL4A	P83876	142 aa	Known RBP	15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ARFRP1	Q13795	201 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	LRIF1	Q5T3J3	769 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SLC2A7	Q6PXP3	512 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FIGLA	Q6QHK4	219 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	LRRTM3	Q86VH5	581 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	LMO3	Q8TAP4	145 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	BORCS6	Q96GS4	357 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	LRCH3	Q96II8	777 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NLGN3	Q9NZ94	848 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532		A0A0X1KG70	313 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TLR4	O00206	839 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RNF13	O43567	381 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SCO2	O43819	266 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	UFM1	P61960	85 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SPANXN4	Q5MJ08	99 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PLET1	Q6UQ28	207 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TMPPE	Q6ZT21	453 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GPAT4	Q86UL3	456 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	BBS10	Q8TAM1	723 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PIK3R3	Q92569	461 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FCGR1B	Q92637	280 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	KCNK13	Q9HB14	408 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TNFRSF10D	Q9UBN6	386 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	HCFC2	Q9Y5Z7	792 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ITM2A	O43736	263 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	DFNA5	O60443	496 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CSTA	P01040	98 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZNF84	P51523	738 aa		15.16	■□□□□ 0.02

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