RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	USF3	Q68DE3	2245 aa		4.27	□□□□□ -1.73
ECHDC1-223	ENST00000534442	DENND4C	Q5VZ89	1909 aa		4.27	□□□□□ -1.73
ECHDC1-223	ENST00000534442	FAM47DP	A6NHR8	397 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442		M0QZ24	198 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZBTB5	O15062	677 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	GPAA1	O43292	621 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TRAPPC3	O43617	180 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ITM2A	O43736	263 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZIC3	O60481	467 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RSL1D1	O76021	490 aa	Known RBP	4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	OR4Q2	P0C623	313 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	DDX5	P17844	614 aa	Known RBP	4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CPT2	P23786	658 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	EEF1D	P29692	281 aa	Known RBP	4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ME1	P48163	572 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	METAP1	P53582	386 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RAD23B	P54727	409 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ALCAM	Q13740	583 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SNTB1	Q13884	538 aa	Known RBP	4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CHRNA6	Q15825	494 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ASPRV1	Q53RT3	343 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TCP11X2	Q5H9J9	407 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NSUN5P2	Q63ZY6	315 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RHBDF2	Q6PJF5	856 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CD300LG	Q6UXG3	332 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PAMR1	Q6UXH9	720 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TRAPPC11	Q7Z392	1133 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ADIPOR2	Q86V24	386 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ERC1	Q8IUD2	1116 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	EPHX4	Q8IUS5	362 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	BEST3	Q8N1M1	668 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	GUF1	Q8N442	669 aa	Known RBP	4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	HM13	Q8TCT9	377 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MRPS31	Q92665	395 aa	Known RBP	4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RND1	Q92730	232 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TMEM159	Q96B96	161 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RHBDF1	Q96CC6	855 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZG16B	Q96DA0	208 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SERAC1	Q96JX3	654 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NLRP4	Q96MN2	994 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CYP2S1	Q96SQ9	504 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CMKLR1	Q99788	373 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SH3GL2	Q99962	352 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	API5	Q9BZZ5	524 aa	Known RBP	4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TRIM9	Q9C026	710 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ST6GALNAC4	Q9H4F1	302 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CATSPERB	Q9H7T0	1116 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	LY9	Q9HBG7	655 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PLAC1	Q9HBJ0	212 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NRIP3	Q9NQ35	241 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CNGB3	Q9NQW8	809 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZNF302	Q9NR11	478 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	DEC1	Q9P2X7	70 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	UBA2	Q9UBT2	640 aa	Predicted RBP	4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TINAG	Q9UJW2	476 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NOL7	Q9UMY1	257 aa	Known RBP	4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CDC14A	Q9UNH5	594 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZNF148	Q9UQR1	794 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	BTRC	Q9Y297	605 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	FRMD4B	Q9Y2L6	1034 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	WBP11	Q9Y2W2	641 aa	Known RBP	4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MYOF	Q9NZM1	2061 aa		4.26	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TRGV8	A0A0C4DH27	118 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	IGLV5-39	A0A0G2JS06	123 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442		A6NL46	340 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442		B4DGG1	531 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TMEM189-UBE2V1	I3L0A0	370 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PTGES	O14684	152 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MAP2K7	O14733	419 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PLPP2	O43688	288 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	BCL10	O95999	233 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RAF1	P04049	648 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CYP1A2	P05177	515 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CCL4	P13236	92 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NAGA	P17050	411 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CCL11	P51671	97 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZNF41	P51814	821 aa	Predicted RBP	4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TERF1	P54274	439 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MYBPH	Q13203	477 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	LCN10	Q6JVE6	187 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442		Q6ZTK2	550 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	FAM47E	Q6ZV65	393 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SLFN11	Q7Z7L1	901 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZNF410	Q86VK4	478 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZC3HC1	Q86WB0	502 aa	Known RBP	4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NANOGP1	Q8N7R0	232 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	C3orf56	Q8N813	242 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	OR1J2	Q8NGS2	313 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SLC25A28	Q96A46	364 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	VPS33A	Q96AX1	596 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PTER	Q96BW5	349 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NUDCD1	Q96RS6	583 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PKP2	Q99959	881 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	FAM234A	Q9H0X4	552 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	LHX5	Q9H2C1	402 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	BOLA2	Q9H3K6	86 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZNF696	Q9H7X3	374 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MRGBP	Q9NV56	204 aa		4.25	□□□□□ -1.73

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