RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 NIPAL1Q6NVV3 410 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 H3F3CQ6NXT2 135 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 RPUSD3Q6P087 351 aaKnown RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 ABHD13Q7L211 337 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 CCDC25Q86WR0 208 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 GPSM1Q86YR5 675 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 CTAGE3PQ8IX95 158 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 TCAIMQ8N3R3 496 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 PPM1NQ8N819 430 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 PDPRQ8NCN5 879 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 FBF1Q8TES7 1133 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 TSLPQ969D9 159 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 TBC1D20Q96BZ9 403 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 CNDP1Q96KN2 507 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 C16orf45Q96MC5 204 aaPredicted RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 KLHL31Q9H511 634 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 CLK4Q9HAZ1 481 aaKnown RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 PLA2G3Q9NZ20 509 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 GPRC5BQ9NZH0 403 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 C19orf25Q9UFG5 118 aaPredicted RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 PTBP2Q9UKA9 531 aaKnown RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 TACC2O95359 2948 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 HMX2A2RU54 273 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 WFS1O76024 890 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 SERPIND1P05546 499 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 EPORP19235 508 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 RAB8AP61006 207 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 SKP1P63208 163 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 DLG1Q12959 904 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 SLBPQ14493 270 aaKnown RBP eCLIP13.22□□□□□ -0.29
SF3B2-215ENST00000534307 RBBP5Q15291 538 aaKnown RBP13.22□□□□□ -0.29
SF3B2-215ENST00000534307 NSDHLQ15738 373 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 SFT2D3Q587I9 215 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 SULT1C3Q6IMI6 304 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 C8orf74Q6P047 294 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 VN1R5Q7Z5H4 357 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 CMC1Q7Z7K0 106 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 ISCA2Q86U28 154 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 ST6GALNAC3Q8NDV1 305 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 GRHL3Q8TE85 626 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 FAR1Q8WVX9 515 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 WDR34Q96EX3 536 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 SEC16BQ96JE7 1060 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 LRRC1Q9BTT6 524 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 PITHD1Q9GZP4 211 aaPredicted RBP13.22□□□□□ -0.29
SF3B2-215ENST00000534307 EHD1Q9H4M9 534 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 NT5DC2Q9H857 520 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 AGPAT4Q9NRZ5 378 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 DNAJC11Q9NVH1 559 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 ASB1Q9Y576 335 aa13.22□□□□□ -0.29
SF3B2-215ENST00000534307 HIVEP1P15822 2718 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 IGKV3D-11A0A0A0MRZ8 115 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 TRAV17A0A0B4J275 112 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 DYTNA2CJ06 578 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 ANKUB1A6NFN9 424 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 URADA6NGE7 173 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 WDPCPO95876 746 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 CD22P20273 847 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 JAK1P23458 1154 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 GSTM2P28161 218 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 TNFRSF8P28908 595 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 HNRNPH1P31943 449 aaKnown RBP13.21□□□□□ -0.29
SF3B2-215ENST00000534307 HNF4AP41235 474 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 HSPA7P48741 367 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 RIPPLY3P57055 190 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 ARG2P78540 354 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 E2F2Q14209 437 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 EXT1Q16394 746 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 WHAMMP3Q1A5X7 153 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 BTBD16Q32M84 506 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 ADPRMQ3LIE5 342 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 FBXO48Q5FWF7 155 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 UBAP2Q5T6F2 1119 aaKnown RBP13.21□□□□□ -0.29
SF3B2-215ENST00000534307 ZNF324BQ6AW86 544 aaPredicted RBP13.21□□□□□ -0.29
SF3B2-215ENST00000534307 PAPD4Q6PIY7 484 aaKnown RBP13.21□□□□□ -0.29
SF3B2-215ENST00000534307 TMIGD1Q6UXZ0 262 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 QSOX2Q6ZRP7 698 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 RELL1Q8IUW5 271 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 TTLQ8NG68 377 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 OR1N1Q8NGS0 311 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 PRR7Q8TB68 274 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 M1APQ8TC57 530 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 ATOH8Q96SQ7 321 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 NPAS2Q99743 824 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 SLX1AQ9BQ83 275 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 CAPS2Q9BXY5 557 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 CNOT10Q9H9A5 744 aaKnown RBP13.21□□□□□ -0.29
SF3B2-215ENST00000534307 MMP25Q9NPA2 562 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 WWOXQ9NZC7 414 aa13.21□□□□□ -0.29
SF3B2-215ENST00000534307 LRIT2A6NDA9 550 aa13.2□□□□□ -0.3
SF3B2-215ENST00000534307 WIPF3A6NGB9 483 aa13.2□□□□□ -0.3
SF3B2-215ENST00000534307 CLEC3AO75596 197 aa13.2□□□□□ -0.3
SF3B2-215ENST00000534307 STK16O75716 305 aa13.2□□□□□ -0.3
SF3B2-215ENST00000534307 URI1O94763 535 aaPredicted RBP13.2□□□□□ -0.3
SF3B2-215ENST00000534307 CLDN1O95832 211 aa13.2□□□□□ -0.3
SF3B2-215ENST00000534307 F10P00742 488 aa13.2□□□□□ -0.3
SF3B2-215ENST00000534307 RNH1P13489 461 aaKnown RBP13.2□□□□□ -0.3
SF3B2-215ENST00000534307 CRABP2P29373 138 aa13.2□□□□□ -0.3
SF3B2-215ENST00000534307 SLC26A5P58743 744 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms