RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ERICH5Q6P6B1 374 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 FAM9CQ8IZT9 166 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 LSM14AQ8ND56 463 aaKnown RBP18.59■□□□□ 0.57
CAPN1-226ENST00000533820 TOR1AIP2Q8NFQ8 470 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 HRASLS5Q96KN8 279 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 SUV39H2Q9H5I1 410 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 NDUFAF4Q9P032 175 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 PCDHGB3Q9Y5G1 929 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 FAM227AF5H4B4 570 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 GCM2O75603 506 aaPredicted RBP18.58■□□□□ 0.57
CAPN1-226ENST00000533820 C1SP09871 688 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 SRCP12931 536 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 CST5P28325 142 aaPredicted RBP18.58■□□□□ 0.57
CAPN1-226ENST00000533820 ELP6Q0PNE2 266 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 ST3GAL4Q11206 333 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 ZNF783Q6ZMS7 281 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 Q6ZVL8 140 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 Q6ZVU0 165 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 GLRX5Q86SX6 157 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 CADM2Q8N3J6 435 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 SYNPOQ8N3V7 929 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 IPCEF1Q8WWN9 437 aaPredicted RBP18.58■□□□□ 0.57
CAPN1-226ENST00000533820 KCNS3Q9BQ31 491 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 IMPAD1Q9NX62 359 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 MAP4K5Q9Y4K4 846 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 LYVE1Q9Y5Y7 322 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 C5orf42Q9H799 3197 aa18.58■□□□□ 0.57
CAPN1-226ENST00000533820 SSX4O60224 188 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 GREM1O60565 184 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 KCNK2O95069 426 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 CBSLP0DN79 551 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 CBSP35520 551 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 MED22Q15528 200 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 EXOC3L2Q2M3D2 409 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 ARMCX4Q5H9R4 360 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 LGI4Q8N135 537 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 C14orf119Q9NWQ9 140 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 PSORS1C1Q9UIG5 152 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 ARHGEF33A8MVX0 844 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 DSCR3O14972 297 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 GALK2Q01415 458 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.58■□□□□ 0.56
CAPN1-226ENST00000533820 OTOP2Q7RTS6 562 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 ZNF605Q86T29 641 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 DNAJC22Q8N4W6 341 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 OVCA2Q8WZ82 227 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 FAM120CQ9NX05 1096 aaKnown RBP18.58■□□□□ 0.56
CAPN1-226ENST00000533820 DUSP12Q9UNI6 340 aa18.58■□□□□ 0.56
CAPN1-226ENST00000533820 AGAP5A6NIR3 686 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 METTL15A6NJ78 407 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 CLDN24A6NM45 220 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 HAT1O14929 419 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 CA12O43570 354 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 KRT8P05787 483 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 GABRR2P28476 465 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 PTGS2P35354 604 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 MEF2AQ02078 507 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-226ENST00000533820 GGTA1PQ4G0N0 100 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 ZNF385BQ569K4 471 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 DESI1Q6ICB0 168 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 RNF165Q6ZSG1 346 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 GATAD2AQ86YP4 633 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 SLC44A2Q8IWA5 706 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-226ENST00000533820 NFKBIDQ8NI38 313 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 CIDECQ96AQ7 238 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-226ENST00000533820 BCL7BQ9BQE9 202 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 DOHHQ9BU89 302 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 SPASTQ9UBP0 616 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 KCNN3Q9UGI6 736 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 TMEM229AB2RXF0 380 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 NRG2O14511 850 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-226ENST00000533820 SCAMP2O15127 329 aaKnown RBP18.57■□□□□ 0.56
CAPN1-226ENST00000533820 SOCS5O75159 536 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 B3GALNT1O75752 331 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 CYP7B1O75881 506 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 S100A5P33763 92 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 MADCAM1Q13477 382 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.57■□□□□ 0.56
CAPN1-226ENST00000533820 NPAS3Q8IXF0 933 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 ATL1Q8WXF7 558 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 OR4K3Q96R72 315 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 OR5M11Q96RB7 305 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 CDADC1Q9BWV3 514 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 MTG2Q9H4K7 406 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 MS4A12Q9NXJ0 267 aa18.57■□□□□ 0.56
CAPN1-226ENST00000533820 RUVBL1Q9Y265 456 aaKnown RBP18.57■□□□□ 0.56
CAPN1-226ENST00000533820 FAM172BPA6NC97 362 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 PCDH17O14917 1159 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 HNMTP50135 292 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 RPS13P62277 151 aaKnown RBP18.56■□□□□ 0.56
CAPN1-226ENST00000533820 SNRPD1P62314 119 aaKnown RBP18.56■□□□□ 0.56
CAPN1-226ENST00000533820 UAP1L1Q3KQV9 507 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-226ENST00000533820 PARP16Q8N5Y8 322 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 C11orf65Q8NCR3 313 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 PITX2Q99697 317 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 CCM2Q9BSQ5 444 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 RWDD3Q9Y3V2 267 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 CLCA1A8K7I4 914 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 SLC16A8O95907 504 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms