RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 LINGO2Q7L985 606 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 CCDC116Q8IYX3 515 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 ZNF101Q8IZC7 436 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 APCDD1Q8J025 514 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 CLIP4Q8N3C7 705 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 SDR16C5Q8N3Y7 309 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 C7orf57Q8NEG2 295 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 RPLP0P6Q8NHW5 317 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 DNAJA4Q8WW22 397 aaPredicted RBP6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 NR4A3Q92570 626 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 PRR11Q96HE9 360 aaPredicted RBP6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 TAS2R1Q9NYW7 299 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 TMEM59LQ9UK28 342 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 MGAT4AQ9UM21 535 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 MYOM1P52179 1685 aa6.17□□□□□ -1.42
UBQLN1-206ENST00000533705 MEIS3P2A8K0S8 358 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 E7ENX8 843 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CYP17A1P05093 508 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 GSTT2BP0CG30 244 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 PGAM2P15259 253 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ACRV1P26436 265 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 GPX6P59796 221 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 PITX1P78337 314 aaPredicted RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 FOXK1P85037 733 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CSTF1Q05048 431 aaKnown RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 LIPJQ5W064 366 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ANKRD26P1Q6NSI1 321 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ZNF627Q7L945 461 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 UBQLNLQ8IYU4 475 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ARMC10Q8N2F6 343 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CSNK1A1LQ8N752 337 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 TMEM40Q8WWA1 233 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 DDX1Q92499 740 aaKnown RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 SIGLEC10Q96LC7 697 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 KCNC2Q96PR1 638 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 HHIPQ96QV1 700 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 NPLQ9BXD5 320 aaPredicted RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 UCK2Q9BZX2 261 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 REEP4Q9H6H4 257 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 STOML2Q9UJZ1 356 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 URB1O60287 2271 aaKnown RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 DUOX1Q9NRD9 1551 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 SAGE2PA6NJ88 616 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 E7EQ34 232 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 TEX46H3BTG2 121 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 SEMA3DO95025 777 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 IFI30P13284 250 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 RNH1P13489 461 aaKnown RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 FUT4P22083 530 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ECHS1P30084 290 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CXCL12P48061 93 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 KCNC1P48547 511 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 DEFB103AP81534 67 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 HHEXQ03014 270 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 LRP8Q14114 963 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 NNATQ16517 81 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 MSS51Q4VC12 460 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 FLYWCH1Q4VC44 716 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 TNFAIP8L3Q5GJ75 292 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 HSDL2Q6YN16 418 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 RNF130Q86XS8 419 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 RAB43Q86YS6 212 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ZNF611Q8N823 705 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ASB9Q96DX5 294 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 LRCH3Q96II8 777 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 IL17FQ96PD4 163 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 OR1F2PQ96R84 312 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 PELOQ9BRX2 385 aaKnown RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 DPH7Q9BTV6 452 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 LINC00597Q9H2U6 94 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 RMI1Q9H9A7 625 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ANKRA2Q9H9E1 313 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CXorf21Q9HAI6 301 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 SNTG1Q9NSN8 517 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ZDHHC7Q9NXF8 308 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 TBC1D24Q9ULP9 559 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 TMEM5Q9Y2B1 443 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 PCDHGB2Q9Y5G2 931 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 IFT172Q9UG01 1749 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 A0A1W2PP18 115 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 EFCAB9A8MZ26 197 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 RNF13O43567 381 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CH25HO95992 272 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 DRD1P21728 446 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CD72P21854 359 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 SLC6A6P31641 620 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 GSK3BP49841 420 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 WDR5P61964 334 aaKnown RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 PITPNAQ00169 270 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 FAM189A2Q15884 450 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 KHDC1Q4VXA5 237 aaKnown RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 KIAA0319Q5VV43 1072 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 SLC36A4Q6YBV0 504 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 LRRC69Q6ZNQ3 347 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ZNF550Q7Z398 422 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ZNF761Q86XN6 746 aaPredicted RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 FAM86B1Q8N7N1 296 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 OR4K1Q8NGD4 311 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 C9orf43Q8TAL5 461 aaPredicted RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ZDHHC1Q8WTX9 485 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms