RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PTCHD1Q96NR3 888 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 OR1F2PQ96R84 312 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 LPAR4Q99677 370 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 TMEM79Q9BSE2 394 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 SARGQ9BW04 601 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 SLC6A16Q9GZN6 736 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 CNOT10Q9H9A5 744 aaKnown RBP9.83□□□□□ -0.84
CAPN1-225ENST00000533704 LANCL2Q9NS86 450 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 DNAJC11Q9NVH1 559 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 STMN3Q9NZ72 180 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 RNF112Q9ULX5 631 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 A8MUA0 341 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 MAGEB17A8MXT2 336 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 SUPT3HB4E1H0 165 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 C4orf51C9J302 202 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 FAM227AF5H4B4 570 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 TAPBPO15533 448 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 CCNT2O60583 730 aaKnown RBP9.82□□□□□ -0.84
CAPN1-225ENST00000533704 SUPT3HO75486 399 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 WISP3O95389 354 aaPredicted RBP9.82□□□□□ -0.84
CAPN1-225ENST00000533704 SERPINA6P08185 405 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 RNF224P0DH78 156 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 RNH1P13489 461 aaKnown RBP9.82□□□□□ -0.84
CAPN1-225ENST00000533704 IL10P22301 178 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 STXBP1P61764 594 aaKnown RBP9.82□□□□□ -0.84
CAPN1-225ENST00000533704 BTN3A2P78410 334 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 BTG2P78543 158 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 GUCY2DQ02846 1103 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 BMPR2Q13873 1038 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 XKR6Q5GH73 641 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 PLAG1Q6DJT9 500 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 SULT1C3Q6IMI6 304 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 NIPAL1Q6NVV3 410 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 TMIGD1Q6UXZ0 262 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 TBC1D1Q86TI0 1168 aaPredicted RBP9.82□□□□□ -0.84
CAPN1-225ENST00000533704 BEST3Q8N1M1 668 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 KRT78Q8N1N4 520 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 BCORP1Q8N888 145 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 ST6GALNAC3Q8NDV1 305 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 PLPP5Q8NEB5 264 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 CREB3L4Q8TEY5 395 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 FAR1Q8WVX9 515 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 HAS2Q92819 552 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 ZNF354BQ96LW1 612 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 PSMG3-AS1Q96PY0 264 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 LRRC1Q9BTT6 524 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 ALG9Q9H6U8 611 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 OLAHQ9NV23 265 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 ANKRD10Q9NXR5 420 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 ERRFI1Q9UJM3 462 aaPredicted RBP9.82□□□□□ -0.84
CAPN1-225ENST00000533704 CACNA1DQ01668 2161 aa9.82□□□□□ -0.84
CAPN1-225ENST00000533704 PCNX1Q96RV3 2341 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 OR5H15A6NDH6 313 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 ANKDD1BA6NHY2 528 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 E2F3O00716 465 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 ERI3O43414 337 aaKnown RBP9.81□□□□□ -0.84
CAPN1-225ENST00000533704 PRMT3O60678 531 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 STK16O75716 305 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 C1QAP02745 245 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 TFEBP19484 476 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 MAOAP21397 527 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 HNRNPH1P31943 449 aaKnown RBP9.81□□□□□ -0.84
CAPN1-225ENST00000533704 TAS2R50P59544 299 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 GTF3C1Q12789 2109 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 HYAL2Q12891 473 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 ZKSCAN8Q15776 578 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-225ENST00000533704 EXT1Q16394 746 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 PDK4Q16654 411 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 GLIPR1L2Q4G1C9 344 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 ADNP2Q6IQ32 1131 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 CYS1Q717R9 158 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 ZNF572Q7Z3I7 529 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-225ENST00000533704 CRLF3Q8IUI8 442 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 KLHDC8AQ8IYD2 350 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 CA13Q8N1Q1 262 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 ARMC2Q8NEN0 867 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 TTLQ8NG68 377 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 M1APQ8TC57 530 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 GAL3ST3Q96A11 431 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 KIAA1191Q96A73 305 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 C5orf34Q96MH7 638 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 CAPS2Q9BXY5 557 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 PHACTR1Q9C0D0 580 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 AICDAQ9GZX7 198 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 COPS7BQ9H9Q2 264 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-225ENST00000533704 NMRAL1Q9HBL8 299 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 KLHL1Q9NR64 748 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 GPRC5BQ9NZH0 403 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 ABI3Q9P2A4 366 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 PLEKHB1Q9UF11 243 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-225ENST00000533704 OSGIN2Q9Y236 505 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 SLC5A6Q9Y289 635 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 DOPEY1Q5JWR5 2465 aa9.81□□□□□ -0.84
CAPN1-225ENST00000533704 CROCCQ5TZA2 2017 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 UBXN8O00124 270 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 B3GALT2O43825 422 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 MAN1A2O60476 641 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 PRAMEF2O60811 474 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 SH3BGRLO75368 114 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 SLC35E2BP0CK96 405 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms