RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 SORBS1Q9BX66 1292 aaKnown RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 B3GNT4Q9C0J1 378 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 CHST8Q9H2A9 424 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 ZNF304Q9HCX3 659 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 PNPOQ9NVS9 261 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 NMRK1Q9NWW6 199 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 HCN3Q9P1Z3 774 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 IFT80Q9P2H3 777 aaPredicted RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 GPN3Q9UHW5 284 aaPredicted RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 PADI1Q9ULC6 663 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 TMEM184BQ9Y519 407 aaPredicted RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 PTGDR2Q9Y5Y4 395 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 CEP295Q9C0D2 2601 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 AHCTF1Q8WYP5 2266 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 A0A088AWK7 358 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 C4orf51C9J302 202 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 FOXE1O00358 373 aaPredicted RBP16.57■□□□□ 0.24
NXF1-216ENST00000533499 RDH16O75452 317 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 ETHE1O95571 254 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 DLGAP3O95886 979 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 LINC00032P0C843 101 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 ZNF10P21506 573 aaPredicted RBP16.57■□□□□ 0.24
NXF1-216ENST00000533499 SSR2P43308 183 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 RPL14P50914 215 aaKnown RBP16.57■□□□□ 0.24
NXF1-216ENST00000533499 EMP3P54852 163 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 PCBP4P57723 403 aaKnown RBP16.57■□□□□ 0.24
NXF1-216ENST00000533499 SKP1P63208 163 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 MAT1AQ00266 395 aaKnown RBP16.57■□□□□ 0.24
NXF1-216ENST00000533499 GUCY1A3Q02108 690 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 TGIF1Q15583 401 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 NKAIN1Q4KMZ8 207 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 TMEM35AQ53FP2 167 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 C10orf62Q5T681 223 aaPredicted RBP16.57■□□□□ 0.24
NXF1-216ENST00000533499 DEPDC1Q5TB30 811 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 FAM47EQ6ZV65 393 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 CRLF3Q8IUI8 442 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 DSELQ8IZU8 1212 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 TWIST2Q8WVJ9 160 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 CKAP2Q8WWK9 683 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 FGF11Q92914 225 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 MAGEB18Q96M61 343 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 GBP5Q96PP8 586 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 AICDAQ9GZX7 198 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 AKIRIN1Q9H9L7 192 aaPredicted RBP16.57■□□□□ 0.24
NXF1-216ENST00000533499 TSC22D4Q9Y3Q8 395 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 SLC22A7Q9Y694 548 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 AKAP13Q12802 2813 aa16.57■□□□□ 0.24
NXF1-216ENST00000533499 C9J4A7 227 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 PIP5K1BO14986 540 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 FOXS1O43638 330 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 SNUPNO95149 360 aaKnown RBP16.56■□□□□ 0.24
NXF1-216ENST00000533499 TBX6O95947 436 aaPredicted RBP16.56■□□□□ 0.24
NXF1-216ENST00000533499 FGF4P08620 206 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 PIM1P11309 404 aaPredicted RBP16.56■□□□□ 0.24
NXF1-216ENST00000533499 CERS1P27544 350 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 RORAP35398 523 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 CSTF3Q12996 717 aaKnown RBP16.56■□□□□ 0.24
NXF1-216ENST00000533499 FAM53BQ14153 422 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 SYT16Q17RD7 645 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 LCN10Q6JVE6 187 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 PRMT9Q6P2P2 845 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 ABHD17CQ6PCB6 329 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 PDSS2Q86YH6 399 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 PRSS58Q8IYP2 241 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 GBP7Q8N8V2 638 aaPredicted RBP16.56■□□□□ 0.24
NXF1-216ENST00000533499 SRFBP1Q8NEF9 429 aaKnown RBP16.56■□□□□ 0.24
NXF1-216ENST00000533499 CT55Q8WUE5 264 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 KCNC2Q96PR1 638 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 MRPL1Q9BYD6 325 aaKnown RBP16.56■□□□□ 0.24
NXF1-216ENST00000533499 ACPTQ9BZG2 426 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 LHX9Q9NQ69 397 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 AHSPQ9NZD4 102 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 TRPC4Q9UBN4 977 aa16.56■□□□□ 0.24
NXF1-216ENST00000533499 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.56■□□□□ 0.24
NXF1-216ENST00000533499 C1QTNF9BB2RNN3 333 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 TCP11X1B4DZS4 312 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 SLC28A1O00337 649 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 KLF11O14901 512 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 RGS14O43566 566 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 B3GALT2O43825 422 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 GALR3O60755 368 aaPredicted RBP16.55■□□□□ 0.24
NXF1-216ENST00000533499 SNNO75324 88 aaPredicted RBP16.55■□□□□ 0.24
NXF1-216ENST00000533499 NSA2O95478 260 aaKnown RBP16.55■□□□□ 0.24
NXF1-216ENST00000533499 C1QTNF9P0C862 333 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 LIPCP11150 499 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 HSD3B1P14060 373 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 TCN2P20062 427 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 HSD3B2P26439 372 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 GCGRP47871 477 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 CUL3Q13618 768 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 NR6A1Q15406 480 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 MFSD4BQ5TF39 518 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 OR4C11Q6IEV9 310 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 OR5T3Q8NGG3 340 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 KCNE4Q8WWG9 221 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 GATA6Q92908 595 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 LRFN5Q96NI6 719 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 DCBLD2Q96PD2 775 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 TBCDQ9BTW9 1192 aa16.55■□□□□ 0.24
NXF1-216ENST00000533499 RBCK1Q9BYM8 510 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms