RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 RNH1P13489 461 aaKnown RBP16.71■□□□□ 0.27
PCF11-206ENST00000533018 MAOAP21397 527 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 PAFAH1B1P43034 410 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 CA7P43166 264 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 SLC12A2P55011 1212 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 PPP1R3AQ16821 1122 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 SLC25A25Q6KCM7 469 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 CAPN12Q6ZSI9 719 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 GALNTL5Q7Z4T8 443 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 CREG2Q8IUH2 290 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 ARMC2Q8NEN0 867 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 ELP5Q8TE02 316 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 ITLN2Q8WWU7 325 aaPredicted RBP16.71■□□□□ 0.27
PCF11-206ENST00000533018 CCT6BQ92526 530 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 SCMH1Q96GD3 660 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 VPS39Q96JC1 886 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 FAR2Q96K12 515 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 SLC6A16Q9GZN6 736 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 KCNF1Q9H3M0 494 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 RUBCNLQ9H714 662 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 GRPEL1Q9HAV7 217 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 NPIPA1Q9UND3 350 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 SAR1BQ9Y6B6 198 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 APCP25054 2843 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 CTAGE15A4D2H0 777 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 NCF1BA6NI72 391 aaPredicted RBP16.7■□□□□ 0.26
PCF11-206ENST00000533018 NCF1CA8MVU1 366 aaPredicted RBP16.7■□□□□ 0.26
PCF11-206ENST00000533018 EFCAB8A8MWE9 144 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 H2AFYO75367 372 aaKnown RBP16.7■□□□□ 0.26
PCF11-206ENST00000533018 WDR47O94967 919 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 NCF1P14598 390 aaPredicted RBP16.7■□□□□ 0.26
PCF11-206ENST00000533018 HNMTP50135 292 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 TAS2R39P59534 338 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 BTN3A2P78410 334 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 ART3Q13508 389 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 FRG1Q14331 258 aaKnown RBP16.7■□□□□ 0.26
PCF11-206ENST00000533018 FASTKD3Q14CZ7 662 aaKnown RBP16.7■□□□□ 0.26
PCF11-206ENST00000533018 KRTCAP3Q53RY4 240 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 QSOX2Q6ZRP7 698 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.7■□□□□ 0.26
PCF11-206ENST00000533018 CTAGE6Q86UF2 777 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 TICAM1Q8IUC6 712 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 ZBED8Q8IZ13 594 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 GPR137Q96N19 417 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 UNKQ9C0B0 810 aaKnown RBP16.7■□□□□ 0.26
PCF11-206ENST00000533018 GPAMQ9HCL2 828 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 PRDM9Q9NQV7 894 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 TINAGQ9UJW2 476 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 OARD1Q9Y530 152 aa16.7■□□□□ 0.26
PCF11-206ENST00000533018 SAGE2PA6NJ88 616 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 USP27XA6NNY8 438 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 SLC25A12O75746 678 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 NEURL1O76050 574 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 SERPINA6P08185 405 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 PRF1P14222 555 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 GNAZP19086 355 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 GRNP28799 593 aaKnown RBP16.69■□□□□ 0.26
PCF11-206ENST00000533018 TPP2P29144 1249 aaPredicted RBP16.69■□□□□ 0.26
PCF11-206ENST00000533018 GDF5P43026 501 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 CYB561P49447 251 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 STXBP1P61764 594 aaKnown RBP16.69■□□□□ 0.26
PCF11-206ENST00000533018 CDKL1Q00532 357 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 HYAL2Q12891 473 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 TSNQ15631 228 aaKnown RBP16.69■□□□□ 0.26
PCF11-206ENST00000533018 C3AR1Q16581 482 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 C18orf21Q32NC0 220 aaPredicted RBP16.69■□□□□ 0.26
PCF11-206ENST00000533018 RPTNQ6XPR3 784 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 ADAMTSL2Q86TH1 951 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 LGI4Q8N135 537 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 ZNF808Q8N4W9 903 aaPredicted RBP16.69■□□□□ 0.26
PCF11-206ENST00000533018 ANKRD49Q8WVL7 239 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 ANKRD7Q92527 254 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 NAPGQ99747 312 aaPredicted RBP16.69■□□□□ 0.26
PCF11-206ENST00000533018 DEFB126Q9BYW3 111 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 CLK4Q9HAZ1 481 aaKnown RBP16.69■□□□□ 0.26
PCF11-206ENST00000533018 PRM3Q9NNZ6 103 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 NECTIN3Q9NQS3 549 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 NSMCE4AQ9NXX6 385 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 SNX24Q9Y343 169 aa16.69■□□□□ 0.26
PCF11-206ENST00000533018 A0A0G2JN53 185 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 CCDC188H7C350 402 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 FCHO1O14526 889 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 PIAS1O75925 651 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 C1GALT1C1LP0DN25 315 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 HTR1EP28566 365 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 TNFRSF8P28908 595 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 ZNF468Q5VIY5 522 aaPredicted RBP16.68■□□□□ 0.26
PCF11-206ENST00000533018 CEP97Q8IW35 865 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.68■□□□□ 0.26
PCF11-206ENST00000533018 CA13Q8N1Q1 262 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 CREB3L4Q8TEY5 395 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 THAP3Q8WTV1 239 aaPredicted RBP16.68■□□□□ 0.26
PCF11-206ENST00000533018 TMEM125Q96AQ2 219 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 KRT12Q99456 494 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 MOCS1Q9NZB8 636 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 TXNDC16Q9P2K2 825 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 KLF2Q9Y5W3 355 aaPredicted RBP16.68■□□□□ 0.26
PCF11-206ENST00000533018 PKDREJQ9NTG1 2253 aa16.68■□□□□ 0.26
PCF11-206ENST00000533018 TCRBV16S1A1N1A0A5B0 115 aa16.67■□□□□ 0.26
PCF11-206ENST00000533018 ASPDHA6ND91 283 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms