RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 DCAF10Q5QP82 559 aa18.77■□□□□ 0.6
CPSF1-209ENST00000532725 RIBC1Q8N443 379 aaPredicted RBP18.77■□□□□ 0.6
CPSF1-209ENST00000532725 GAL3ST3Q96A11 431 aa18.77■□□□□ 0.6
CPSF1-209ENST00000532725 FER1L6-AS2Q96M78 137 aa18.77■□□□□ 0.6
CPSF1-209ENST00000532725 NTMT1Q9BV86 223 aa18.77■□□□□ 0.6
CPSF1-209ENST00000532725 TMEM109Q9BVC6 243 aa18.77■□□□□ 0.6
CPSF1-209ENST00000532725 REXO4Q9GZR2 422 aaKnown RBP18.77■□□□□ 0.6
CPSF1-209ENST00000532725 ACSS2Q9NR19 701 aa18.77■□□□□ 0.6
CPSF1-209ENST00000532725 LGALS13Q9UHV8 139 aa18.77■□□□□ 0.6
CPSF1-209ENST00000532725 RNF11Q9Y3C5 154 aa18.77■□□□□ 0.6
CPSF1-209ENST00000532725 H0YIV9 168 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 GLRA3O75311 464 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 CEACAM4O75871 244 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 CLDN9O95484 217 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 PRB1P04280 392 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 HEXBP07686 556 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 KRT4P19013 534 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 ATP5F1P24539 256 aaPredicted RBP18.76■□□□□ 0.59
CPSF1-209ENST00000532725 SKP1P63208 163 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 BTN3A2P78410 334 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 IFFO1Q0D2I5 559 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 RBBP7Q16576 425 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 RPS27LQ71UM5 84 aaKnown RBP18.76■□□□□ 0.59
CPSF1-209ENST00000532725 OR2L5Q8NG80 312 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 OR11G2Q8NGC1 345 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 OR52B6Q8NGF0 335 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 ZNF483Q8TF39 744 aaPredicted RBP18.76■□□□□ 0.59
CPSF1-209ENST00000532725 PEX11GQ96HA9 241 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 QRFPRQ96P65 431 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 F2RL3Q96RI0 385 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 SLC25A18Q9H1K4 315 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 ADGRE2Q9UHX3 823 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 MKL2Q9ULH7 1088 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 GRID1Q9ULK0 1009 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 PLAAQ9Y263 795 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 PCDHGA11Q9Y5H2 935 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 BOD1L1Q8NFC6 3051 aa18.76■□□□□ 0.59
CPSF1-209ENST00000532725 OR2W5A6NFC9 320 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 MASP2O00187 686 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 PPP6CO00743 305 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 ERI3O43414 337 aaKnown RBP18.75■□□□□ 0.59
CPSF1-209ENST00000532725 PCNAP12004 261 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 IMPDH1P20839 514 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 SERPINB1P30740 379 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 HPDP32754 393 aaPredicted RBP18.75■□□□□ 0.59
CPSF1-209ENST00000532725 PIK3CBP42338 1070 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 CCNG1P51959 295 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 PRKAA2P54646 552 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 CDH13P55290 713 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 HERVK_113P63132 956 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 OLR1P78380 273 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 CPSF6Q16630 551 aaKnown RBP eCLIP18.75■□□□□ 0.59
CPSF1-209ENST00000532725 UNC50Q53HI1 259 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 ABHD17CQ6PCB6 329 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 TMEM205Q6UW68 189 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 UBE3DQ7Z6J8 389 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 MYLK4Q86YV6 388 aaPredicted RBP18.75■□□□□ 0.59
CPSF1-209ENST00000532725 HUS1BQ8NHY5 278 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 ATP6V1E2Q96A05 226 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 FAR2Q96K12 515 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 CDK15Q96Q40 435 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 OR1F2PQ96R84 312 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 ERVK-6Q9BXR3 956 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 MS4A8Q9BY19 250 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 VN1R1Q9GZP7 353 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 MLXIPLQ9NP71 852 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 SEMA4BQ9NPR2 832 aaPredicted RBP18.75■□□□□ 0.59
CPSF1-209ENST00000532725 PRDM7Q9NQW5 492 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 LANCL2Q9NS86 450 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 FBXL4Q9UKA2 621 aa18.75■□□□□ 0.59
CPSF1-209ENST00000532725 COL6A6A6NMZ7 2263 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 A0A1B0GTL3 188 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 A0A1W2PQ72 361 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 G3V2L1 256 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 MKRN2OSH3BPM6 223 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 K7EM74 188 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 ALOX12BO75342 701 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 C1QL1O75973 258 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 TGFB1P01137 390 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 PROCP04070 461 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 CYC1P08574 325 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 PLA2G16P53816 162 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 SOX8P57073 446 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 TRAF3Q13114 568 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 RUNX2Q13950 521 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 ZNF678Q5SXM1 525 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 TCTN3Q6NUS6 607 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 TRABD2AQ86V40 505 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 SLC22A9Q8IVM8 553 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 IQCKQ8N0W5 287 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 C4orf33Q8N1A6 199 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 RNF175Q8N4F7 328 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 PLPP5Q8NEB5 264 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 WDR20Q8TBZ3 569 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 TBC1D20Q96BZ9 403 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 C8orf44Q96CB5 159 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 CMTM7Q96FZ5 175 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 ATP13A2Q9NQ11 1180 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 PSD3Q9NYI0 1048 aa18.74■□□□□ 0.59
CPSF1-209ENST00000532725 CFAP46Q8IYW2 2715 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms