RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 FBXO48Q5FWF7 155 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 XKR6Q5GH73 641 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 ABHD17BQ5VST6 288 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 PLAG1Q6DJT9 500 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 ISCA2Q86U28 154 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 CTAGE6Q86UF2 777 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 PDPRQ8NCN5 879 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 PRR7Q8TB68 274 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 EXT2Q93063 718 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 SMIM10Q96HG1 83 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 SEC16BQ96JE7 1060 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 MAGEB10Q96LZ2 347 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-204ENST00000532550 PTCHD1Q96NR3 888 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.23■□□□□ 0.19
PHRF1-204ENST00000532550 TSPYL1Q9H0U9 437 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 EHD1Q9H4M9 534 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 ALG9Q9H6U8 611 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 COL12A1Q99715 3063 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 SVILO95425 2214 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 PSMD12O00232 456 aaPredicted RBP16.22■□□□□ 0.19
PHRF1-204ENST00000532550 CCNT2O60583 730 aaKnown RBP16.22■□□□□ 0.19
PHRF1-204ENST00000532550 PRMT3O60678 531 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 AGFG2O95081 481 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 CBX6O95503 412 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 LTA4HP09960 611 aaKnown RBP16.22■□□□□ 0.19
PHRF1-204ENST00000532550 CTAGE8P0CG41 777 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 MYBL2P10244 700 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 RNH1P13489 461 aaKnown RBP16.22■□□□□ 0.19
PHRF1-204ENST00000532550 TFEBP19484 476 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 HPDP32754 393 aaPredicted RBP16.22■□□□□ 0.19
PHRF1-204ENST00000532550 KCNC1P48547 511 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 OR4D2P58180 307 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 BTN3A2P78410 334 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 UAP1Q16222 522 aaPredicted RBP16.22■□□□□ 0.19
PHRF1-204ENST00000532550 EXT1Q16394 746 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 PDK4Q16654 411 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 HIST2H2ACQ16777 129 aaPredicted RBP16.22■□□□□ 0.19
PHRF1-204ENST00000532550 SFT2D3Q587I9 215 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 MROH9Q5TGP6 573 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 HIST2H2AA3Q6FI13 130 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 CCDC91Q7Z6B0 441 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 CTAGE4Q8IX94 777 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.22■□□□□ 0.19
PHRF1-204ENST00000532550 AMER2Q8N7J2 671 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 M1APQ8TC57 530 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 IFT81Q8WYA0 676 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 PTCD3Q96EY7 689 aaKnown RBP16.22■□□□□ 0.19
PHRF1-204ENST00000532550 LPAR4Q99677 370 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 CD244Q9BZW8 370 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 RHBGQ9H310 441 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 KCNK13Q9HB14 408 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 PRM3Q9NNZ6 103 aa16.22■□□□□ 0.19
PHRF1-204ENST00000532550 A0A087X1B8 175 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 TRAV17A0A0B4J275 112 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 LRIT2A6NDA9 550 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 ANKUB1A6NFN9 424 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 SUPT3HB4E1H0 165 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 KIF2AO00139 706 aaPredicted RBP16.21■□□□□ 0.19
PHRF1-204ENST00000532550 SUPT3HO75486 399 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 CLEC3AO75596 197 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 GMPRP36959 345 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 TNFSF10P50591 281 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 ZNF33BQ06732 778 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 DLG1Q12959 904 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 LAPTM5Q13571 262 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 DOC2AQ14183 400 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 FAM83EQ2M2I3 478 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 GLE1Q53GS7 698 aaKnown RBP16.21■□□□□ 0.19
PHRF1-204ENST00000532550 PAGE2BQ5JRK9 111 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 RPUSD3Q6P087 351 aaKnown RBP16.21■□□□□ 0.19
PHRF1-204ENST00000532550 PAPD4Q6PIY7 484 aaKnown RBP16.21■□□□□ 0.19
PHRF1-204ENST00000532550 SUN3Q8TAQ9 357 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 TSLPQ969D9 159 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 GAL3ST3Q96A11 431 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 NXNL1Q96CM4 212 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 ZNF354BQ96LW1 612 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 BARD1Q99728 777 aaKnown RBP16.21■□□□□ 0.19
PHRF1-204ENST00000532550 EFCAB11Q9BUY7 163 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 IGSF5Q9NSI5 407 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 NINJ2Q9NZG7 142 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 NUDT4Q9NZJ9 180 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 COPG2Q9UBF2 871 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 DMGDHQ9UI17 866 aaKnown RBP16.21■□□□□ 0.19
PHRF1-204ENST00000532550 NTNG1Q9Y2I2 539 aa16.21■□□□□ 0.19
PHRF1-204ENST00000532550 USP9XQ93008 2570 aaPredicted RBP16.2■□□□□ 0.18
PHRF1-204ENST00000532550 A0A088AWK7 358 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 KERAO60938 352 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 WDPCPO95876 746 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 F10P00742 488 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 C2P06681 752 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 ZNF10P21506 573 aaPredicted RBP16.2■□□□□ 0.18
PHRF1-204ENST00000532550 IRF8Q02556 426 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 CHIT1Q13231 466 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 BMPR2Q13873 1038 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 QSOX2Q6ZRP7 698 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 CYP4X1Q8N118 509 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 CA13Q8N1Q1 262 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 NOA1Q8NC60 698 aaKnown RBP16.2■□□□□ 0.18
PHRF1-204ENST00000532550 ARMC2Q8NEN0 867 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 GRHL3Q8TE85 626 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms