RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 FANCEQ9HB96 536 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 OCIAD1Q9NX40 245 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 SERTAD3Q9UJW9 196 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 MRPS2Q9Y399 296 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 TMED5Q9Y3A6 229 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 KNTC1P50748 2209 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 RTCAO00442 366 aaKnown RBP17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 CSO75390 466 aaKnown RBP17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 ALDOCP09972 364 aaKnown RBP17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 ZNF888P0CJ79 500 aaPredicted RBP17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 ACPPP15309 386 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 BSGP35613 385 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 PLA2G16P53816 162 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 EMP3P54852 163 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 ITGA1P56199 1179 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 RAE1P78406 368 aaKnown RBP17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 TGM3Q08188 693 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 MAD2L1Q13257 205 aaPredicted RBP17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 GRM7Q14831 915 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 OR4C11Q6IEV9 310 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 TRIM40Q6P9F5 258 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 ABHD13Q7L211 337 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 CCDC197Q8NCU1 140 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 OR8K5Q8NH50 307 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 DEPDC7Q96QD5 511 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 C17orf62Q9BQA9 187 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 TBCDQ9BTW9 1192 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 SORBS1Q9BX66 1292 aaKnown RBP17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 PRDM7Q9NQW5 492 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 ASIC5Q9NY37 505 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 HEY2Q9UBP5 337 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 SLC22A7Q9Y694 548 aa17.08■□□□□ 0.32
PPP1CA-208ENST00000532446 EFCAB7A8K855 629 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 AGRPO00253 132 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 UBDO15205 165 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 HYAL3O43820 417 aaPredicted RBP17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 TSFMP43897 325 aaKnown RBP17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 GCGRP47871 477 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 RAB8AP61006 207 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 FOXM1Q08050 763 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 GARNL3Q5VVW2 1013 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 IL23RQ5VWK5 629 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 NOXRED1Q6NXP6 359 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 TLDC1Q6P9B6 456 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 GPR135Q8IZ08 494 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 CACNA2D3Q8IZS8 1091 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 CACTIN-AS1Q8N1I8 211 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 ZCCHC10Q8TBK6 192 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 LIN37Q96GY3 246 aaPredicted RBP17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 C10orf90Q96M02 699 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 QRFPRQ96P65 431 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 TEFMQ96QE5 360 aaKnown RBP17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 CMKLR1Q99788 373 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 C1orf50Q9BV19 199 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 DDX31Q9H8H2 851 aaKnown RBP17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 IRAK4Q9NWZ3 460 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 NOP53Q9NZM5 478 aaKnown RBP17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 AKAP7Q9P0M2 348 aaPredicted RBP17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 ADAM29Q9UKF5 820 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 TRIM33Q9UPN9 1127 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 CLCA2Q9UQC9 943 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 DLGAP4Q9Y2H0 992 aa17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 POLR3HQ9Y535 204 aaPredicted RBP17.07■□□□□ 0.32
PPP1CA-208ENST00000532446 A0A0G2JN53 185 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 HYKKA2RU49 373 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 EEDO75530 441 aaKnown RBP17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 KCNK5O95279 499 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 MED26O95402 600 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 KLK1P06870 262 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 ALOX12P18054 663 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 TIA1P31483 386 aaKnown RBP eCLIP17.06■□□□□ 0.321e-22■■■■■ 32.6
PPP1CA-208ENST00000532446 DIO3P55073 304 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 MC2RQ01718 297 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 FAM53BQ14153 422 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 IL11RAQ14626 422 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 HERC3Q15034 1050 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 NDUFA9Q16795 377 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 CYB5D1Q6P9G0 228 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 ZNF793Q6ZN11 406 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 PAGE2Q7Z2X7 111 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 BPHLQ86WA6 291 aaPredicted RBP17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 PARP9Q8IXQ6 854 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 TTC29Q8NA56 475 aaPredicted RBP17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 FBXO8Q9NRD0 319 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 AIG1Q9NVV5 245 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 RARRES3Q9UL19 164 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 PTPRBP23467 1997 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 SEC16AO15027 2179 aa17.06■□□□□ 0.32
PPP1CA-208ENST00000532446 B4E171 279 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 PCDH7O60245 1069 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 MYO1DO94832 1006 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 KLHL18O94889 574 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 SCELO95171 688 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 B3GALT4O96024 378 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 FGF5P12034 268 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 BCKDHAP12694 445 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 CCL4P13236 92 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 HIST1H1TP22492 207 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 ATP5A1P25705 553 aaKnown RBP17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 MAPK1P28482 360 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms